RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA870096" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA870096 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14877806 14877806 PRJNA870096_S_NODE_14632_length_478_cov_7.193103_g12995_i0 PRJNA870096 14632 478 7.193103 34.38303234 Absidia glauca 4829 Fungi Fungi 185 4.4e-42   NTclustered gi|2312|emb|X54730.1| 4829 g12995 i0 78 47.4518828451883 300 62 62 4 181 478 1887 1590 Absidia glauca tef-1 gene for elongation factor 1-alpha blastn 22682 185 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Absidia Absidia glauca
23802426 23802426 PRJNA870096_S_NODE_51959_length_244_cov_1.786070_g50295_i0 PRJNA870096 51959 244 1.78607 4.3580108 Lichtheimia ornata 688661 Fungi Fungi 113 9.95e-21   NTclustered gi|2553560155|ref|XM_058483067.1| 688661 g50295 i0 88.298 5.39344262295082 94 11 39 0 7 100 898 805 Lichtheimia ornata succinyl-CoA ligase [ADP/GDP-forming] subunit alpha, mitochondrial (O0I10_002992), partial mRNA blastn 1316 113 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;