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contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA870096" and tax_phylum = "Apicomplexa"

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tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 17 ✖

tax_clade 1

bioproject 1

  • PRJNA870096 · 17 ✖

analysis 1

  • blastn · 17 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
850589 850589 PRJNA870096_S_NODE_78721_length_198_cov_0.896774_g77057_i0 PRJNA870096 78721 198 0.896774 1.77561252 Cryptosporidium sp. chipmunk genotype I 1280935 SAR_Eukaryotes SAR_Eukaryotes 183 5.829999999999998e-42   NTclustered gi|2787703497|ref|XM_067346083.1| 1280935 g77057 i0 84.103 98.0454545454545 195 25 98 1 1 195 94 282 Cryptosporidium sp. chipmunk genotype I elongation factor 1-alpha (ELE39_002979), partial mRNA blastn 19413 183 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium sp. chipmunk genotype I
3789185 3789185 PRJNA870096_S_NODE_25823_length_354_cov_17.106109_g24159_i0 PRJNA870096 25823 354 17.106109 60.55562586 Goussia 169155 SAR_Eukaryotes SAR_Eukaryotes 409 1.72e-109   NTclustered gi|328460765|gb|GU479640.1| 947543 g24159 i0 88.473 77.6158192090395 347 23 94 10 21 354 401 743 Goussia carpelli isolate CYP139-#139 18S ribosomal RNA gene, partial sequence blastn 27476 409 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia carpelli
4679042 4679042 PRJNA870096_S_NODE_88524_length_187_cov_1.215278_g86860_i0 PRJNA870096 88524 187 1.215278 2.27256986 Eimeria tenella 5802 SAR_Eukaryotes SAR_Eukaryotes 159 9.169999999999999e-35   NTclustered gi|311692297|dbj|AB564273.1| 5802 g86860 i0 83.626 127.235294117647 171 26 90 1 4 172 2292 2462 Eimeria tenella apicoplast gene for 26S large subunit ribosomal RNA, complete sequence, strain: NIAH blastn 23793 159 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
4679140 4679140 PRJNA870096_S_NODE_95404_length_180_cov_3.489051_g93740_i0 PRJNA870096 95404 180 3.489051 6.2802918 Eimeria paludosa 1497015 SAR_Eukaryotes SAR_Eukaryotes 243 8.439999999999999e-60   NTclustered gi|653601277|gb|KJ767188.1| 1497015 g93740 i0 91.16 91.4611111111111 181 12 100 4 1 180 1288 1465 Eimeria paludosa isolate DMH01 28S ribosomal RNA gene, partial sequence blastn 16463 243 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria paludosa
5953263 5953263 PRJNA870096_S_NODE_27425_length_343_cov_5.663333_g25761_i0 PRJNA870096 27425 343 5.663333 19.42523219 Eimeria sp. 1729940 SAR_Eukaryotes SAR_Eukaryotes 289 2.2699999999999996e-73   NTclustered gi|1086927510|gb|KX094956.1| 1729940 g25761 i0 82.477 96.5626822157434 331 57 96 1 1 330 2602 2272 Eimeria sp. strain OTU-Z2 mitochondrion, complete genome blastn 33121 289 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria sp.
8502581 8502581 PRJNA870096_S_NODE_133367_length_154_cov_3.459459_g131703_i0 PRJNA870096 133367 154 3.459459 5.32756686 Goussia sp. BMR-2011c 980545 SAR_Eukaryotes SAR_Eukaryotes 180 5.56e-41   NTclustered gi|328460783|gb|GU479658.1| 980545 g131703 i0 94.783 33.1753246753247 115 6 75 0 40 154 1527 1413 Goussia sp. BMR-2011c isolate CAR620-#620 18S ribosomal RNA gene, partial sequence blastn 5109 180 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia sp. BMR-2011c
9777860 9777860 PRJNA870096_S_NODE_26268_length_351_cov_6.769481_g24604_i0 PRJNA870096 26268 351 6.769481 23.76087831 Goussia bayae 2303416 SAR_Eukaryotes SAR_Eukaryotes 388 2.23e-103   NTclustered gi|1450318675|gb|MH758782.1| 2303416 g24604 i0 88.218 88.1965811965812 331 32 93 7 1 327 354 27 Goussia bayae isolate Choptank large subunit ribosomal RNA gene, partial sequence blastn 30957 388 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia bayae
12328375 12328375 PRJNA870096_S_NODE_10250_length_576_cov_16.763602_g8686_i0 PRJNA870096 10250 576 16.763602 96.55834752 Goussia balatonica 947538 SAR_Eukaryotes SAR_Eukaryotes 706 0   NTclustered gi|324022100|gb|GU593717.1| 947538 g8686 i0 94.004 74.9114583333333 467 25 88 3 112 576 2054 1589 Goussia balatonica strain 608 28S ribosomal RNA gene, partial sequence blastn 43149 706 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia balatonica
12329697 12329697 PRJNA870096_S_NODE_8110_length_653_cov_6.132787_g6654_i0 PRJNA870096 8110 653 6.132787 40.04709911 Babesia ovata 189622 SAR_Eukaryotes SAR_Eukaryotes 1173 0   NTclustered gi|1624698158|ref|XM_029013947.1| 189622 g6654 i0 99.081 1759.35681470138 653 6 100 0 1 653 1897 1245 Babesia ovata endonuclease-reverse transcriptase (BOVATA_050300), partial mRNA blastn 1148860 1173 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovata
13603601 13603601 PRJNA870096_S_NODE_24651_length_363_cov_3.237500_g22987_i0 PRJNA870096 24651 363 3.2375 11.752125 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 148 4.27e-31   NTclustered gi|820688590|tpe|LN714475.1| 572307 g22987 i0 92.308 28.8870523415978 104 8 29 0 259 362 951293 951190 TPA_asm: Neospora caninum Liverpool, chromosome chrIb, complete genome blastn 10486 148 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
14878202 14878202 PRJNA870096_S_NODE_52372_length_243_cov_1.800000_g50708_i0 PRJNA870096 52372 243 1.8 4.374 Eimeria mitis 44415 SAR_Eukaryotes SAR_Eukaryotes 62.1 3.64e-5   NTclustered gi|1939228054|ref|XM_038023111.1| 44415 g50708 i0 92.857 0.172839506172839 42 3 17 0 193 234 898 857 Eimeria mitis 58 kDa phosphoprotein, putative (EMH_0003140), partial mRNA blastn 42 62.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria mitis
14878669 14878669 PRJNA870096_S_NODE_89412_length_186_cov_1.398601_g87748_i0 PRJNA870096 89412 186 1.398601 2.60139786 Plasmodium gallinaceum 5849 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.004   NTclustered gi|1620115444|ref|XM_028670889.1| 5849 g87748 i0 100 0.155913978494624 29 0 16 0 115 143 1070 1042 Plasmodium gallinaceum spindle assembly abnormal protein 4, putative (SAS4), partial mRNA blastn 29 54.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium gallinaceum
17428029 17428029 PRJNA870096_S_NODE_18754_length_419_cov_9.135638_g17100_i0 PRJNA870096 18754 419 9.135638 38.27832322 Goussia carpelli 947543 SAR_Eukaryotes SAR_Eukaryotes 658 0   NTclustered gi|324022099|gb|GU593716.1| 947543 g17100 i0 96.954 95.5871121718377 394 9 94 3 26 417 444 836 Goussia carpelli strain 23 28S ribosomal RNA gene, partial sequence blastn 40051 658 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia carpelli
18701641 18701641 PRJNA870096_S_NODE_52615_length_242_cov_4.984925_g50951_i0 PRJNA870096 52615 242 4.984925 12.0635185 Apicomplexa sp. ABonacolta-2023a 3096982 SAR_Eukaryotes SAR_Eukaryotes 267 7.15e-67   NTclustered gi|2623109821|gb|OR832858.1| 3096982 g50951 i0 91.667 71.4628099173554 192 16 79 0 1 192 3959 4150 Apicomplexa sp. ABonacolta-2023a 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17294 267 1 Eukaryota Sar   Apicomplexa         Apicomplexa sp. ABonacolta-2023a
19976779 19976779 PRJNA870096_S_NODE_50196_length_248_cov_7.873171_g48532_i0 PRJNA870096 50196 248 7.873171 19.52546408 Goussia sp. BMR-2011c 980545 SAR_Eukaryotes SAR_Eukaryotes 396 9e-106   NTclustered gi|328460764|gb|GU479639.1| 980545 g48532 i0 98.655 90.375 223 3 90 0 1 223 349 127 Goussia sp. BMR-2011c isolate GCAR812-#812 18S ribosomal RNA gene, partial sequence blastn 22413 396 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Goussia Goussia sp. BMR-2011c
21252118 21252118 PRJNA870096_S_NODE_31697_length_318_cov_2.214545_g30033_i0 PRJNA870096 31697 318 2.214545 7.0422531 Isospora amphiboluri 1692217 SAR_Eukaryotes SAR_Eukaryotes 339 2.0399999999999995e-88   NTclustered gi|913022872|gb|KR108297.1| 1692217 g30033 i0 85.893 71.6823899371069 319 43 100 2 1 318 914 1231 Isospora amphiboluri voucher AHL12-019929 mitochondrion, complete genome blastn 22795 339 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Isospora Isospora amphiboluri
22526240 22526240 PRJNA870096_S_NODE_11998_length_532_cov_3.147239_g10391_i0 PRJNA870096 11998 532 3.147239 16.74331148 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 134 1.81e-26   NTclustered gi|820691464|tpe|LN714483.1| 572307 g10391 i0 83.916 6.07330827067669 143 19 27 3 386 526 5992954 5993094 TPA_asm: Neospora caninum Liverpool, chromosome chrVIII, complete genome blastn 3231 134 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;