RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA867519 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
848003 848003 PRJNA867519_P_NODE_10381_length_353_cov_1.632143_g10227_i0 PRJNA867519 10381 353 1.632143 5.76146479 Schistosoma haematobium 6185 Platyhelminthes Platyhelminthes 60.2 1.99e-4   NTclustered gi|2318774084|ref|XM_012943401.2| 6185 g10227 i0 97.143 0.410764872521246 35 1 10 0 16 50 107 73 Schistosoma haematobium Peptide-N(4)-(N-acetyl-beta- glucosaminyl)asparagine amidase (NGLY1_1), partial mRNA blastn 145 60.2 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma haematobium
848104 848104 PRJNA867519_P_NODE_24981_length_252_cov_2.424581_g24827_i0 PRJNA867519 24981 252 2.424581 6.10994412 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 436 5.4e-118   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g24827 i0 98.016 77.4761904761905 252 4 100 1 1 252 8711 8961 Stenostomum sthenum mitochondrion, complete genome blastn 19524 436 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
17426336 17426336 PRJNA867519_P_NODE_27454_length_249_cov_0.875000_g27300_i0 PRJNA867519 27454 249 0.875 2.17875 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 52.8 0.023   NTclustered gi|690496552|emb|LN043556.1| 99802 g27300 i0 100 0.112449799196787 28 0 11 0 1 28 3551 3524 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_scaffold0042488 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei
19974778 19974778 PRJNA867519_P_NODE_6156_length_438_cov_35.397260_g6002_i0 PRJNA867519 6156 438 35.39726 155.0399988 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 730 0   NTclustered gi|68479954|gb|DQ076149.1| 6182 g6002 i0 96.804 1 438 13 100 1 1 438 449 13 Schistosoma japonicum clone 1XA1 unknown mRNA blastn 438 730 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21639034 21639034 PRJNA867519_P_NODE_31197_length_244_cov_0.900585_g31043_i0 PRJNA867519 31197 244 0.900585 2.1974274 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 93.5 1.3e-14   NTclustered gi|1246719163|gb|MF383122.1| 2039861 g31043 i0 90.141 26.0040983606557 71 7 29 0 146 216 1151 1221 Sluysia triapertura isolate MR1645 28S ribosomal RNA gene, partial sequence blastn 6345 93.5 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Tricladida Uteriporidae Sluysia Sluysia triapertura
22524827 22524827 PRJNA867519_P_NODE_25698_length_251_cov_0.865169_g25544_i0 PRJNA867519 25698 251 0.865169 2.17157419 Spirometra erinaceieuropaei 99802 Platyhelminthes Platyhelminthes 54.7 0.006   NTclustered gi|690838780|emb|LN336351.1| 99802 g25544 i0 100 0.115537848605578 29 0 12 0 67 95 597 625 Spirometra erinaceieuropaei genome assembly S_erinaceieuropaei ,scaffold SPER_contig0110926 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Diphyllobothriidea Diphyllobothriidae Spirometra Spirometra erinaceieuropaei

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;