contig_metadata
13 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_phylum = "Nematoda"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 848070 | 848070 | PRJNA867519_P_NODE_21121_length_271_cov_1.166667_g20967_i0 | PRJNA867519 | 21121 | 271 | 1.166667 | 3.16166757 | Pristionchus hoplostomus | 1355913 | Nematoda | Nematoda | 159 | 1.42e-34 | NTclustered | gi|524845304|gb|KC819362.1| | 1355913 | g20967 | i0 | 79.556 | 6.38376383763838 | 225 | 44 | 83 | 2 | 14 | 237 | 260 | 37 | Pristionchus hoplostomus strain JU1090 subunit ribosomal protein 35 (rpl-35) mRNA, partial cds | blastn | 1730 | 159 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus hoplostomus | |
| 4676630 | 4676630 | PRJNA867519_P_NODE_5844_length_448_cov_2.464000_g5690_i0 | PRJNA867519 | 5844 | 448 | 2.464 | 11.03872 | Pristionchus pauli | 376545 | Nematoda | Nematoda | 292 | 2.35e-74 | NTclustered | gi|150982019|gb|EF634598.1| | 376545 | g5690 | i0 | 81.492 | 5.03571428571429 | 362 | 61 | 80 | 6 | 46 | 404 | 37 | 395 | Pristionchus pauli large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 2256 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus pauli | |
| 7226273 | 7226273 | PRJNA867519_P_NODE_17066_length_289_cov_0.824074_g16912_i0 | PRJNA867519 | 17066 | 289 | 0.824074 | 2.38157386 | Parapristionchus giblindavisi | 1187980 | Nematoda | Nematoda | 178 | 4.23e-40 | NTclustered | gi|387600364|gb|JQ677914.1| | 1187980 | g16912 | i0 | 79.259 | 72.7301038062284 | 270 | 44 | 91 | 10 | 22 | 285 | 638 | 375 | Diplogastridae gen. sp. EJR-2012 large ribosomal protein 2 mRNA, partial cds | blastn | 21019 | 178 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Parapristionchus | Parapristionchus giblindavisi | |
| 8500994 | 8500994 | PRJNA867519_P_NODE_23567_length_260_cov_1.235294_g23413_i0 | PRJNA867519 | 23567 | 260 | 1.235294 | 3.2117644 | Pristionchus sp. 13 RS5231 | 452807 | Nematoda | Nematoda | 82.4 | 3.02e-11 | NTclustered | gi|150982219|gb|EF634698.1| | 452807 | g23413 | i0 | 87.324 | 1.53461538461538 | 71 | 9 | 27 | 0 | 176 | 246 | 71 | 1 | Pristionchus sp. 13 RS5231 large subunit ribosomal protein 29 (rpl-29) mRNA, complete cds | blastn | 399 | 82.4 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 13 RS5231 | |
| 8501059 | 8501059 | PRJNA867519_P_NODE_32307_length_243_cov_0.905882_g32153_i0 | PRJNA867519 | 32307 | 243 | 0.905882 | 2.20129326 | Pristionchus uniformis | 358041 | Nematoda | Nematoda | 165 | 2.6999999999999997e-36 | NTclustered | gi|150984659|gb|EF634991.1| | 358041 | g32153 | i0 | 82.812 | 42.5925925925926 | 192 | 25 | 76 | 6 | 46 | 230 | 4 | 194 | Pristionchus uniformis small subunit ribosomal protein 28 (rps-28) mRNA, complete cds | blastn | 10350 | 165 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus uniformis | |
| 11440719 | 11440719 | PRJNA867519_P_NODE_12229_length_331_cov_2.271318_g12075_i0 | PRJNA867519 | 12229 | 331 | 2.271318 | 7.51806258 | Opisthokonta | 33154 | Nematoda | Nematoda | 189 | 2.2799999999999993e-43 | NTclustered | gi|150982115|gb|EF634646.1| | 335527 | g12075 | i0 | 89.796 | 42.2205438066465 | 147 | 15 | 44 | 0 | 129 | 275 | 173 | 27 | Pristionchus maupasi large subunit ribosomal protein 27a (rpl-27a) mRNA, partial cds | blastn | 13975 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus maupasi | |
| 13601908 | 13601908 | PRJNA867519_P_NODE_7111_length_412_cov_2.648968_g6957_i0 | PRJNA867519 | 7111 | 412 | 2.648968 | 10.91374816 | Pristionchus sp. 15 RS5229 | 452809 | Nematoda | Nematoda | 254 | 1.01e-62 | NTclustered | gi|150982261|gb|EF634719.1| | 452809 | g6957 | i0 | 83.333 | 13.9077669902913 | 276 | 42 | 67 | 4 | 110 | 383 | 303 | 30 | Pristionchus sp. 15 RS5229 large subunit ribosomal protein 30 (rpl-30) mRNA, partial cds | blastn | 5730 | 254 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus sp. 15 RS5229 | |
| 14876183 | 14876183 | PRJNA867519_P_NODE_3832_length_537_cov_1.879310_g3680_i0 | PRJNA867519 | 3832 | 537 | 1.87931 | 10.0918947 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 189 | 3.85e-43 | NTclustered | gi|1376142591|ref|XM_024651617.1| | 34506 | g3680 | i0 | 77.922 | 3.49906890130354 | 308 | 64 | 57 | 4 | 231 | 537 | 429 | 125 | Strongyloides ratti Peptidyl-prolyl cis-trans isomerase D (SRAE_2000074700), partial mRNA | blastn | 1879 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti | |
| 18699449 | 18699449 | PRJNA867519_P_NODE_22975_length_262_cov_1.629630_g22821_i0 | PRJNA867519 | 22975 | 262 | 1.62963 | 4.2696306 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 84.2 | 8.48e-12 | NTclustered | gi|690018452|emb|LM525690.1| | 174720 | g22821 | i0 | 83.516 | 0.347328244274809 | 91 | 13 | 34 | 2 | 8 | 97 | 26564 | 26475 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_contig0000087 | blastn | 91 | 84.2 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 18699572 | 18699572 | PRJNA867519_P_NODE_6635_length_425_cov_1.889205_g6481_i0 | PRJNA867519 | 6635 | 425 | 1.889205 | 8.02912125 | Strongyloides papillosus | 174720 | Nematoda | Nematoda | 315 | 4.73e-81 | NTclustered | gi|687022644|emb|LM525558.1| | 174720 | g6481 | i0 | 80.324 | 57.0235294117647 | 432 | 71 | 100 | 11 | 1 | 425 | 232420 | 232844 | Strongyloides papillosus genome assembly S_papillosus_LIN ,scaffold SPAL_scaffold0000004 | blastn | 24235 | 315 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides papillosus | |
| 22524746 | 22524746 | PRJNA867519_P_NODE_13878_length_314_cov_2.236515_g13724_i0 | PRJNA867519 | 13878 | 314 | 2.236515 | 7.0226571 | Pristionchus bucculentus | 1317126 | Nematoda | Nematoda | 320 | 7.29e-83 | NTclustered | gi|479330856|gb|KC463849.1| | 1317126 | g13724 | i0 | 85.342 | 88.9108280254777 | 307 | 45 | 98 | 0 | 1 | 307 | 329 | 23 | Pristionchus bucculentus strain RS5596 small subunit ribosomal protein 14 (rps14) gene, partial cds | blastn | 27918 | 320 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Neodiplogasteridae | Pristionchus | Pristionchus bucculentus | |
| 22524895 | 22524895 | PRJNA867519_P_NODE_3738_length_542_cov_2.298507_g3586_i0 | PRJNA867519 | 3738 | 542 | 2.298507 | 12.45790794 | Rhabditolaimus sp. 1 VS-2014 | 1538706 | Nematoda | Nematoda | 292 | 2.88e-74 | NTclustered | gi|675118995|gb|KJ877377.1| | 1538706 | g3586 | i0 | 79.475 | 65.0221402214022 | 419 | 80 | 77 | 5 | 1 | 416 | 3 | 418 | Rhabditolaimus sp. 1 VS-2014 strain RSA134 large subunit ribosomal protein 23 (rpl-23) mRNA, partial cds | blastn | 35242 | 292 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Diplogasteridae | Rhabditolaimus | Rhabditolaimus sp. 1 VS-2014 | |
| 25074167 | 25074167 | PRJNA867519_P_NODE_18780_length_281_cov_1.480769_g18626_i0 | PRJNA867519 | 18780 | 281 | 1.480769 | 4.16096089 | Strongyloides ratti | 34506 | Nematoda | Nematoda | 189 | 1.8899999999999993e-43 | NTclustered | gi|1376143271|ref|XM_024652004.1| | 34506 | g18626 | i0 | 81.435 | 15.8434163701068 | 237 | 38 | 83 | 6 | 1 | 234 | 135 | 368 | Strongyloides ratti Histone H2A.v (SRAE_2000109300), partial mRNA | blastn | 4452 | 189 | 1 | Eukaryota | Opisthokonta | Metazoa | Nematoda | Chromadorea | Rhabditida | Strongyloididae | Strongyloides | Strongyloides ratti |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;