RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_phylum = "Endomyxa"

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tax_superkingdom 1

tax_phylum 1

  • Endomyxa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA867519 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13601682 13601682 PRJNA867519_P_NODE_1031_length_919_cov_2.791962_g906_i0 PRJNA867519 1031 919 2.791962 25.65813078 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 584 7.399999999999998e-162   NTclustered gi|302026178|gb|GQ377695.1| 862247 g906 i0 79.062 74.0163220892274 874 165 94 16 55 919 1302 438 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 68021 584 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12
14876225 14876225 PRJNA867519_P_NODE_8272_length_386_cov_2.696486_g8118_i0 PRJNA867519 8272 386 2.696486 10.40843596 Arachnula sp. CL12 862247 SAR_Eukaryotes SAR_Eukaryotes 499 1.09e-136   NTclustered gi|302026178|gb|GQ377695.1| 862247 g8118 i0 90.13 90.9663212435233 385 36 99 2 1 384 287 670 Arachnula sp. CL12 elongation factor 1 alpha mRNA, partial cds blastn 35113 499 1 Eukaryota Sar   Endomyxa   Vampyrellida Leptophryidae Arachnula Arachnula sp. CL12

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;