RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA867519 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7226235 7226235 PRJNA867519_P_NODE_12646_length_327_cov_1.185039_g12492_i0 PRJNA867519 12646 327 1.185039 3.87507753 Anneissia japonica 1529436 Echinodermata other_Eukaryota 67.6 1.1e-6   NTclustered gi|1826617701|ref|XM_033241790.1| 1529436 g12492 i0 95.238 0.128440366972477 42 2 13 0 139 180 139 98 PREDICTED: Anneissia japonica cyclin-dependent-like kinase 5 (LOC117101749), mRNA blastn 42 67.6 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
7226352 7226352 PRJNA867519_P_NODE_25966_length_251_cov_0.865169_g25812_i0 PRJNA867519 25966 251 0.865169 2.17157419 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 243 1.2600000000000001e-59   NTclustered gi|2037992446|ref|XM_041609111.1| 7654 g25812 i0 84.615 143.207171314741 247 34 98 4 1 245 1894 1650 PREDICTED: Lytechinus variegatus polyubiquitin-C (LOC121415785), mRNA blastn 35945 243 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus
8500985 8500985 PRJNA867519_P_NODE_22927_length_262_cov_2.317460_g22773_i0 PRJNA867519 22927 262 2.31746 6.0717452 Lytechinus pictus 7653 Echinodermata other_Eukaryota 167 8.18e-37   NTclustered gi|2707422407|ref|XM_054902277.2| 7653 g22773 i0 82.292 14.3358778625954 192 34 73 0 3 194 511 702 PREDICTED: Lytechinus pictus calmodulin (LOC129264402), transcript variant X2, mRNA blastn 3756 167 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
11051801 11051801 PRJNA867519_P_NODE_20689_length_273_cov_1.170000_g20535_i0 PRJNA867519 20689 273 1.17 3.1941 Acanthaster planci 133434 Echinodermata other_Eukaryota 52.8 0.025   NTclustered gi|1229171793|ref|XM_022243516.1| 133434 g20535 i0 100 0.102564102564103 28 0 10 0 27 54 11041 11014 PREDICTED: Acanthaster planci dynein beta chain, ciliary-like (LOC110983882), mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;