RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_kingdom 1

  • Bamfordvirae · 3 ✖

bioproject 1

  • PRJNA867519 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3788901 3788901 PRJNA867519_P_NODE_27163_length_249_cov_0.875000_g27009_i0 PRJNA867519 27163 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 460 3.16e-125   NTclustered gi|1377596870|gb|MF044052.1| 10515 g27009 i0 100 99.9357429718875 249 0 100 0 1 249 3123 2875 human adenovirus 2 isolate HK91, complete genome blastn 24884 460 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
12716588 12716588 PRJNA867519_P_NODE_9050_length_373_cov_2.013333_g8896_i0 PRJNA867519 9050 373 2.013333 7.50973209 root 1 Root_unresolved Root_unresolved 689 0   NTclustered gi|2288721861|gb|OP218818.1| 10535 g8896 i0 100 100 373 0 100 0 1 373 3696 4068 Unidentified adenovirus strain CHOP Ad5 blastn 37300 689 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus unidentified adenovirus
22524856 22524856 PRJNA867519_P_NODE_29618_length_246_cov_0.890173_g29464_i0 PRJNA867519 29618 246 0.890173 2.18982558 Bathycoccus sp. RCC716 virus 3 2530040 Viruses Viruses 54.7 0.006   NTclustered gi|1919266077|gb|MK522039.1| 2530040 g29464 i0 100 0.117886178861789 29 0 12 0 102 130 211593 211565 Bathycoccus sp. RCC716 virus 3 isolate BII-V3, complete genome blastn 29 54.7 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae Prasinovirus Bathycoccus sp. RCC716 virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;