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contig_metadata

15 rows where analysis = "blastn", bioproject = "PRJNA867519" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 15 ✖

bioproject 1

  • PRJNA867519 · 15 ✖

analysis 1

  • blastn · 15 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7226293 7226293 PRJNA867519_P_NODE_19406_length_278_cov_1.502439_g19252_i0 PRJNA867519 19406 278 1.502439 4.17678042 Chlorella sorokiniana 3076 Plants Plants 215 3.08e-51   NTclustered gi|81157942|dbj|AB240142.1| 3076 g19252 i0 81.071 27.0647482014388 280 43 99 10 3 277 2090 1816 Chlorella sorokiniana EF-2 mRNA for elongation factor 2, partial cds blastn 7524 215 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
8500934 8500934 PRJNA867519_P_NODE_15107_length_303_cov_2.008696_g14953_i0 PRJNA867519 15107 303 2.008696 6.08634888 Chlamydomonas reinhardtii 3055 Plants Plants 152 2.7e-32   NTclustered gi|2082260551|ref|XM_001702928.2| 3055 g14953 i0 82.123 16.976897689769 179 30 59 2 1 178 336 159 Chlamydomonas reinhardtii ribosomal protein S11 (CHLRE_12g514500v5), mRNA blastn 5144 152 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
8500998 8500998 PRJNA867519_P_NODE_24027_length_257_cov_2.092391_g23873_i0 PRJNA867519 24027 257 2.092391 5.37744487 Chlamydomonas reinhardtii 3055 Plants Plants 211 3.64e-50   NTclustered gi|18243|emb|X60826.1| 3055 g23873 i0 86.224 76.6926070038911 196 25 76 2 63 257 384 190 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) blastn 19710 211 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
12327183 12327183 PRJNA867519_P_NODE_15210_length_302_cov_2.580786_g15056_i0 PRJNA867519 15210 302 2.580786 7.79397372 Monoraphidium neglectum 145388 Plants Plants 122 2.1099999999999998e-23   NTclustered gi|926789524|ref|XM_014047782.1| 145388 g15056 i0 78.947 5.39735099337748 190 32 62 6 105 290 186 1 Monoraphidium neglectum 60S ribosomal protein L38 mRNA blastn 1630 122 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
13601695 13601695 PRJNA867519_P_NODE_11351_length_341_cov_2.686567_g11197_i0 PRJNA867519 11351 341 2.686567 9.16119347 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 235 2.98e-57   NTclustered gi|28193497|emb|AJ439528.1| 37502 g11197 i0 82.772 75.3607038123167 267 43 78 3 73 337 595 330 Polytomella sp. 'Pringsheim 198.80' mRNA for 40S ribosomal protein s5 (rs5 gene) blastn 25698 235 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
13601924 13601924 PRJNA867519_P_NODE_8831_length_376_cov_2.481848_g8677_i0 PRJNA867519 8831 376 2.481848 9.33174848 Chlamydomonas reinhardtii 3055 Plants Plants 193 2.02e-44   NTclustered gi|2082263148|ref|XM_001693658.2| 3055 g8677 i0 76.55 23.9813829787234 371 75 96 10 7 368 35 402 Chlamydomonas reinhardtii ribosomal protein S3a (CHLRE_13g568650v5), mRNA blastn 9017 193 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
14876112 14876112 PRJNA867519_P_NODE_25412_length_251_cov_0.865169_g25258_i0 PRJNA867519 25412 251 0.865169 2.17157419 Auxenochlorella protothecoides 3075 Plants Plants 237 5.85e-58   NTclustered gi|760437954|ref|XM_011397744.1| 3075 g25258 i0 83.871 22.4701195219124 248 40 99 0 2 249 16 263 Auxenochlorella protothecoides Cell division cycle 5-like protein partial mRNA blastn 5640 237 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
14876125 14876125 PRJNA867519_P_NODE_27172_length_249_cov_0.875000_g27018_i0 PRJNA867519 27172 249 0.875 2.17875 Auxenochlorella protothecoides 3075 Plants Plants 161 3.59e-35   NTclustered gi|760445036|ref|XM_011401285.1| 3075 g27018 i0 79.73 14.1164658634538 222 45 89 0 11 232 2521 2742 Auxenochlorella protothecoides DNA-directed RNA polymerase III subunit rpc1 partial mRNA blastn 3515 161 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Auxenochlorella Auxenochlorella protothecoides
17426422 17426422 PRJNA867519_P_NODE_6334_length_433_cov_7.158333_g6180_i0 PRJNA867519 6334 433 7.158333 30.99558189 Pedinomonas sp. UTEX 'LB 1027' 1108795 Plants Plants 252 3.84e-62   NTclustered gi|371782101|emb|HE610133.1| 1108795 g6180 i0 79.841 42.7090069284065 377 51 84 18 70 433 5092 4728 Pedinomonas sp. UTEX 1027 18S rRNA gene (partial), 5.8S rRNA gene, 28S rRNA gene (partial), ITS1 and ITS2, strain UTEX 1027 blastn 18493 252 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Pedinophyceae Pedinomonadales Pedinomonadaceae Pedinomonas Pedinomonas sp. UTEX 'LB 1027'
18699522 18699522 PRJNA867519_P_NODE_33295_length_241_cov_1.476190_g33141_i0 PRJNA867519 33295 241 1.47619 3.5576179 Monoraphidium neglectum 145388 Plants Plants 233 7.22e-57   NTclustered gi|926782191|ref|XM_014044116.1| 145388 g33141 i0 86.667 70.8174273858921 210 28 87 0 1 210 282 491 Monoraphidium neglectum hypothetical protein mRNA blastn 17067 233 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Sphaeropleales Selenastraceae Monoraphidium Monoraphidium neglectum
19088465 19088465 PRJNA867519_P_NODE_12235_length_331_cov_2.124031_g12081_i0 PRJNA867519 12235 331 2.124031 7.03054261 Eukaryota 2759 Plants Plants 270 7.91e-68   NTclustered gi|18243|emb|X60826.1| 3055 g12081 i0 85.385 84.3504531722054 260 38 79 0 71 330 392 133 C.reinhardtii UBI3 mRNA for ubiquitin-fusion protein (UbCEP52) blastn 27920 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
21639017 21639017 PRJNA867519_P_NODE_25957_length_251_cov_0.865169_g25803_i0 PRJNA867519 25957 251 0.865169 2.17157419 Chlamydomonas 3052 Plants Plants 219 2.1199999999999998e-52   NTclustered gi|2089720333|gb|MZ444836.1| 51694 g25803 i0 82.609 33.0398406374502 253 38 99 6 2 251 1407 1158 Chlamydomonas globosa strain SAG 81.72 hypothetical protein mRNA, partial cds blastn 8293 219 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas globosa
22524920 22524920 PRJNA867519_P_NODE_6018_length_442_cov_15.292683_g5864_i0 PRJNA867519 6018 442 15.292683 67.59365886 Chlorella variabilis 554065 Plants Plants 255 3.04e-63   NTclustered gi|552813385|ref|XM_005843877.1| 554065 g5864 i0 81.731 17.4072398190045 312 52 70 5 71 380 1061 1369 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59785) mRNA, complete cds blastn 7694 255 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
23800362 23800362 PRJNA867519_P_NODE_30399_length_245_cov_0.895349_g30245_i0 PRJNA867519 30399 245 0.895349 2.19360505 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.022   NTclustered gi|2082239839|ref|XM_043059842.1| 3055 g30245 i0 100 0.114285714285714 28 0 11 0 88 115 3918 3945 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g108800v5), mRNA blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
23800364 23800364 PRJNA867519_P_NODE_30439_length_245_cov_0.895349_g30285_i0 PRJNA867519 30439 245 0.895349 2.19360505 Trebouxia sp. SL0000003 3350044 Plants Plants 54.7 0.006   NTclustered gi|2917929806|emb|OZ234924.1| 3350044 g30285 i0 100 0.118367346938776 29 0 12 0 126 154 1579569 1579541 Trebouxia sp. SL0000003 genome assembly, chromosome: 19 blastn 29 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;