RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA864829" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA864829 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1236875 1236875 PRJNA864829_S_NODE_601_length_583_cov_19.352060_g520_i0 PRJNA864829 601 583 19.35206 112.8225098 Eukaryota 2759 Fungi Fungi 78.7 9.5e-10   NTclustered gi|82398540|gb|DQ273807.1| 34480 g520 i0 78.74 10.5951972555746 127 19 22 6 142 267 1759 1878 Basidiobolus ranarum isolate AFTOL-ID 301 28S ribosomal RNA gene, partial sequence blastn 6177 78.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
5064931 5064931 PRJNA864829_S_NODE_1504_length_410_cov_23.072022_g1418_i0 PRJNA864829 1504 410 23.072022 94.5952902 Opisthokonta 33154 Fungi Fungi 204 1.03e-47   NTclustered gi|1433537113|ref|NG_061005.1| 61418 g1418 i0 92.857 34.5609756097561 140 10 34 0 271 410 258 397 Spiromyces minutus NRRL 3067 18S rRNA gene, partial sequence; from reference material blastn 14170 204 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces minutus
8500215 8500215 PRJNA864829_S_NODE_9667_length_202_cov_1.640523_g9581_i0 PRJNA864829 9667 202 1.640523 3.31385646 Spiromyces aspiralis 68401 Fungi Fungi 62.1 2.92e-5   NTclustered gi|311235545|ref|NG_027560.1| 68401 g9581 i0 100 22.2574257425743 33 0 16 0 170 202 2723 2755 Spiromyces aspiralis NRRL 22631 28S rRNA gene, partial sequence; from TYPE material blastn 4496 62.1 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Spiromyces Spiromyces aspiralis
11051023 11051023 PRJNA864829_S_NODE_4049_length_285_cov_2.436441_g3963_i0 PRJNA864829 4049 285 2.436441 6.94385685 Kickxella alabastrina 61397 Fungi Fungi 102 2.58e-17   NTclustered gi|666440441|gb|KF848900.1| 61397 g3963 i0 85 8.42456140350877 100 15 35 0 164 263 2540 2441 Kickxella alabastrina strain NRRL-2693 28S ribosomal RNA gene, partial sequence blastn 2401 102 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Kickxella Kickxella alabastrina
12326441 12326441 PRJNA864829_S_NODE_5870_length_248_cov_14.472362_g5784_i0 PRJNA864829 5870 248 14.472362 35.89145776 Harpella melusinae 370264 Fungi Fungi 95.3 3.67e-15   NTclustered gi|666440445|gb|KF848904.1| 370264 g5784 i0 96.491 20.8346774193548 57 2 23 0 192 248 2172 2116 Harpella melusinae 28S ribosomal RNA gene, partial sequence blastn 5167 95.3 1 Eukaryota Opisthokonta Fungi Zoopagomycota Harpellomycetes Harpellales Harpellaceae Harpella Harpella melusinae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;