RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA864829" and tax_phylum = "Candidatus Fermentibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Fermentibacterota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA864829 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5950582 5950582 PRJNA864829_S_NODE_3105_length_313_cov_6.234848_g3019_i0 PRJNA864829 3105 313 6.234848 19.51507424 Candidatus Fermentibacterota bacterium 2044591 Bacteria Bacteria 102 2.87e-17   NTclustered gi|2874254046|emb|OY970370.1| 2044591 g3019 i0 82.114 67.85303514377 123 18 39 3 190 310 2091744 2091864 MAG: Candidatus Fermentibacteria bacterium isolate MFD00905.bin.1.36 genome assembly, chromosome: 1 blastn 21238 102 1 Bacteria FCB group Pseudomonadati Candidatus Fermentibacterota         Candidatus Fermentibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;