contig_metadata
45 rows where analysis = "blastn", bioproject = "PRJNA864829" and tax_phylum = "Actinomycetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 847246 | 847246 | PRJNA864829_S_NODE_11621_length_187_cov_1.739130_g11535_i0 | PRJNA864829 | 11621 | 187 | 1.73913 | 3.2521731 | uncultured Coriobacteriia bacterium | 1105182 | Bacteria | Bacteria | 113 | 7.240000000000001e-21 | NTclustered | gi|2874253751|emb|OY969691.1| | 1105182 | g11535 | i0 | 81.633 | 8.11229946524064 | 147 | 18 | 77 | 8 | 19 | 162 | 651876 | 651736 | MAG: uncultured Coriobacteriia bacterium isolate MFD03726.bin.c.2 genome assembly, chromosome: 1 | blastn | 1517 | 113 | 1 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | uncultured Coriobacteriia bacterium | |||||
| 847250 | 847250 | PRJNA864829_S_NODE_12521_length_181_cov_1.227273_g12435_i0 | PRJNA864829 | 12521 | 181 | 1.227273 | 2.22136413 | Actinomyces naeslundii | 1655 | Bacteria | Bacteria | 84.2 | 5.45e-12 | NTclustered | gi|1948661326|gb|CP066049.1| | 1655 | g12435 | i0 | 86.076 | 1.8121546961326 | 79 | 9 | 43 | 2 | 104 | 181 | 2627220 | 2627143 | Actinomyces naeslundii strain FDAARGOS_1037 chromosome, complete genome | blastn | 328 | 84.2 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Actinomycetales | Actinomycetaceae | Actinomyces | Actinomyces naeslundii | ||
| 2122664 | 2122664 | PRJNA864829_S_NODE_5762_length_250_cov_2.766169_g5676_i0 | PRJNA864829 | 5762 | 250 | 2.766169 | 6.9154225 | Mycobacterium lacus | 169765 | Bacteria | Bacteria | 303 | 5.66e-78 | NTclustered | gi|1806304829|dbj|AP022581.1| | 169765 | g5676 | i0 | 88.71 | 97.916 | 248 | 28 | 99 | 0 | 3 | 250 | 1536401 | 1536154 | Mycobacterium lacus JCM 15657 DNA, complete genome | blastn | 24479 | 303 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium lacus | ||
| 2512371 | 2512371 | PRJNA864829_S_NODE_11622_length_187_cov_1.739130_g11536_i0 | PRJNA864829 | 11622 | 187 | 1.73913 | 3.2521731 | Corynebacterium | 1716 | Bacteria | Bacteria | 302 | 1.44e-77 | NTclustered | gi|2869836054|gb|CP175786.1| | 43765 | g11536 | i0 | 95.767 | 167.288770053476 | 189 | 4 | 100 | 3 | 1 | 187 | 3126 | 2940 | Corynebacterium amycolatum strain YSMAA1_2_B5 chromosome, complete genome | blastn | 31283 | 302 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium amycolatum | ||
| 2512386 | 2512386 | PRJNA864829_S_NODE_3182_length_310_cov_2.965517_g3096_i0 | PRJNA864829 | 3182 | 310 | 2.965517 | 9.1931027 | Micrococcaceae | 1268 | Bacteria | Bacteria | 568 | 2.3299999999999995e-157 | NTclustered | gi|1883577788|gb|CP059343.1| | 1272 | g3096 | i0 | 99.677 | 408.016129032258 | 310 | 1 | 100 | 0 | 1 | 310 | 1052819 | 1053128 | Kocuria varians strain 80 chromosome, complete genome | blastn | 126485 | 568 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Kocuria | Kocuria varians | ||
| 3398006 | 3398006 | PRJNA864829_S_NODE_16283_length_160_cov_3.513514_g16197_i0 | PRJNA864829 | 16283 | 160 | 3.513514 | 5.6216224 | Mycobacterium kubicae | 120959 | Bacteria | Bacteria | 187 | 3.49e-43 | NTclustered | gi|1937018345|gb|CP065047.1| | 120959 | g16197 | i0 | 88.05 | 2.98125 | 159 | 17 | 99 | 2 | 3 | 160 | 978949 | 979106 | Mycobacterium kubicae strain JCM 13573 chromosome, complete genome | blastn | 477 | 187 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium kubicae | ||
| 3398041 | 3398041 | PRJNA864829_S_NODE_9163_length_207_cov_1.056962_g9077_i0 | PRJNA864829 | 9163 | 207 | 1.056962 | 2.18791134 | Mycobacterium riyadhense | 486698 | Bacteria | Bacteria | 147 | 8.08e-31 | NTclustered | gi|2714667059|emb|OY970456.1| | 486698 | g9077 | i0 | 79.512 | 0.990338164251208 | 205 | 42 | 99 | 0 | 2 | 206 | 4044817 | 4044613 | Mycobacterium riyadhense strain DSM 45176 genome assembly, chromosome: Mriy_45176_ | blastn | 205 | 147 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium riyadhense | ||
| 4675717 | 4675717 | PRJNA864829_S_NODE_2224_length_352_cov_3.683168_g2138_i0 | PRJNA864829 | 2224 | 352 | 3.683168 | 12.96475136 | Actinoplanes sp. N902-109 | 649831 | Bacteria | Bacteria | 169 | 3.1699999999999997e-37 | NTclustered | gi|492002190|gb|CP005929.1| | 649831 | g2138 | i0 | 89.209 | 103.508522727273 | 139 | 10 | 38 | 5 | 192 | 326 | 186034 | 185897 | Actinoplanes sp. N902-109, complete genome | blastn | 36435 | 169 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Actinoplanes | Actinoplanes sp. N902-109 | ||
| 5064942 | 5064942 | PRJNA864829_S_NODE_5364_length_257_cov_1.038462_g5278_i0 | PRJNA864829 | 5364 | 257 | 1.038462 | 2.66884734 | Rothia | 32207 | Bacteria | Bacteria | 475 | 1.1699999999999999e-129 | NTclustered | gi|1247210625|gb|CP023510.1| | 43675 | g5278 | i0 | 100 | 327.412451361868 | 257 | 0 | 100 | 0 | 1 | 257 | 653860 | 653604 | Rothia mucilaginosa strain FDAARGOS_369 chromosome, complete genome | blastn | 84145 | 475 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Rothia | Rothia mucilaginosa | ||
| 5950592 | 5950592 | PRJNA864829_S_NODE_5865_length_249_cov_1.265000_g5779_i0 | PRJNA864829 | 5865 | 249 | 1.265 | 3.14985 | Nocardioides campestrisoli | 2736757 | Bacteria | Bacteria | 460 | 3.16e-125 | NTclustered | gi|1910930593|gb|CP061768.1| | 2736757 | g5779 | i0 | 100 | 264.522088353414 | 249 | 0 | 100 | 0 | 1 | 249 | 1208829 | 1208581 | Nocardioides campestrisoli strain MC1495 chromosome, complete genome | blastn | 65866 | 460 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Nocardioidaceae | Nocardioides | Nocardioides campestrisoli | ||
| 5950596 | 5950596 | PRJNA864829_S_NODE_6385_length_241_cov_1.479167_g6299_i0 | PRJNA864829 | 6385 | 241 | 1.479167 | 3.56479247 | Iamia majanohamensis | 467976 | Bacteria | Bacteria | 381 | 2.4399999999999996e-101 | NTclustered | gi|2440991703|gb|CP116942.1| | 467976 | g6299 | i0 | 95.397 | 137.103734439834 | 239 | 11 | 99 | 0 | 1 | 239 | 2181352 | 2181590 | Iamia majanohamensis strain DSM 19957 chromosome, complete genome | blastn | 33042 | 381 | 1 | Bacteria | Bacillati | Actinomycetota | Acidimicrobiia | Acidimicrobiales | Iamiaceae | Iamia | Iamia majanohamensis | ||
| 7225502 | 7225502 | PRJNA864829_S_NODE_9166_length_207_cov_1.018987_g9080_i0 | PRJNA864829 | 9166 | 207 | 1.018987 | 2.10930309 | Corynebacterium amycolatum | 43765 | Bacteria | Bacteria | 383 | 5.65e-102 | NTclustered | gi|1958412166|gb|CP068169.1| | 43765 | g9080 | i0 | 100 | 366.821256038647 | 207 | 0 | 100 | 0 | 1 | 207 | 19981 | 19775 | Corynebacterium amycolatum strain FDAARGOS_1107 chromosome, complete genome | blastn | 75932 | 383 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium amycolatum | ||
| 7614902 | 7614902 | PRJNA864829_S_NODE_266_length_805_cov_4.572751_g213_i0 | PRJNA864829 | 266 | 805 | 4.572751 | 36.81064555 | Mycobacterium | 1763 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|1176909929|gb|CP019888.1| | 1768 | g213 | i0 | 97.382 | 52.3987577639752 | 382 | 7 | 47 | 2 | 425 | 805 | 1423271 | 1423650 | Mycobacterium kansasii strain 9MK chromosome | blastn | 42181 | 647 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium kansasii | ||
| 7614911 | 7614911 | PRJNA864829_S_NODE_646_length_569_cov_5.028846_g564_i0 | PRJNA864829 | 646 | 569 | 5.028846 | 28.61413374 | Cutibacterium | 1912216 | Bacteria | Bacteria | 1046 | 0 | NTclustered | gi|2548746222|gb|CP129004.1| | 1747 | g564 | i0 | 99.824 | 281.339191564148 | 569 | 1 | 100 | 0 | 1 | 569 | 608438 | 609006 | Cutibacterium acnes strain EASDk81B chromosome, complete genome | blastn | 160082 | 1046 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 8500179 | 8500179 | PRJNA864829_S_NODE_14267_length_171_cov_0.885246_g14181_i0 | PRJNA864829 | 14267 | 171 | 0.885246 | 1.51377066 | Salinibacterium sp. ZJ450 | 2708338 | Bacteria | Bacteria | 54.7 | 0.004 | NTclustered | gi|1910930590|gb|CP061771.1| | 2708338 | g14181 | i0 | 100 | 0.169590643274854 | 29 | 0 | 17 | 0 | 127 | 155 | 2581982 | 2581954 | Salinibacterium sp. ZJ450 chromosome, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Salinibacterium | Salinibacterium sp. ZJ450 | ||
| 8500212 | 8500212 | PRJNA864829_S_NODE_8847_length_210_cov_1.677019_g8761_i0 | PRJNA864829 | 8847 | 210 | 1.677019 | 3.5217399 | Mycobacterium conspicuum | 44010 | Bacteria | Bacteria | 165 | 2.27e-36 | NTclustered | gi|1806447213|dbj|AP022613.1| | 44010 | g8761 | i0 | 82.474 | 5.08095238095238 | 194 | 29 | 90 | 4 | 4 | 193 | 4033452 | 4033644 | Mycobacterium conspicuum JCM 14738 DNA, nearly complete genome | blastn | 1067 | 165 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium conspicuum | ||
| 8889839 | 8889839 | PRJNA864829_S_NODE_2687_length_329_cov_2.210714_g2601_i0 | PRJNA864829 | 2687 | 329 | 2.210714 | 7.27324906 | Mycobacterium | 1763 | Bacteria | Bacteria | 608 | 1.4599999999999995e-169 | NTclustered | gi|2658365817|gb|CP076380.2| | 1767 | g2601 | i0 | 100 | 15 | 329 | 0 | 100 | 0 | 1 | 329 | 958355 | 958027 | Mycobacterium intracellulare strain S1-32 chromosome, complete genome | blastn | 4935 | 608 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium intracellulare | ||
| 9775307 | 9775307 | PRJNA864829_S_NODE_4088_length_284_cov_2.234043_g4002_i0 | PRJNA864829 | 4088 | 284 | 2.234043 | 6.34468212 | Mycobacterium lacus | 169765 | Bacteria | Bacteria | 322 | 1.81e-83 | NTclustered | gi|1806304829|dbj|AP022581.1| | 169765 | g4002 | i0 | 87.455 | 99.0457746478873 | 279 | 35 | 98 | 0 | 6 | 284 | 3651215 | 3651493 | Mycobacterium lacus JCM 15657 DNA, complete genome | blastn | 28129 | 322 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium lacus | ||
| 10165426 | 10165426 | PRJNA864829_S_NODE_68_length_1236_cov_8.941870_g52_i0 | PRJNA864829 | 68 | 1236 | 8.94187 | 110.5215132 | Mycobacterium | 1763 | Bacteria | Bacteria | 2054 | 0 | NTclustered | gi|1877776263|gb|CP059165.1| | 1719132 | g52 | i0 | 97.277 | 105.817961165049 | 1212 | 31 | 98 | 2 | 1 | 1210 | 4559318 | 4560529 | Mycobacterium vicinigordonae strain 24 chromosome, complete genome | blastn | 130791 | 2065 | 0.994673123486683 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium vicinigordonae | ||
| 11440637 | 11440637 | PRJNA864829_S_NODE_2569_length_334_cov_2.989474_g2483_i0 | PRJNA864829 | 2569 | 334 | 2.989474 | 9.98484316 | Atopobiaceae | 1643824 | Bacteria | Bacteria | 180 | 1.38e-40 | NTclustered | gi|2028894723|gb|CP072380.1| | 712157 | g2483 | i0 | 77.918 | 95.1497005988024 | 317 | 51 | 93 | 18 | 26 | 334 | 2799703 | 2799398 | Atopobium sp. oral taxon 416 strain W9116 chromosome, complete genome | blastn | 31780 | 180 | 1 | Bacteria | Bacillati | Actinomycetota | Coriobacteriia | Coriobacteriales | Atopobiaceae | Atopobium | Atopobium sp. oral taxon 416 | ||
| 11440651 | 11440651 | PRJNA864829_S_NODE_829_length_514_cov_3.780645_g744_i0 | PRJNA864829 | 829 | 514 | 3.780645 | 19.4325153 | Cutibacterium | 1912216 | Bacteria | Bacteria | 905 | 0 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g744 | i0 | 100 | 259.519455252918 | 490 | 0 | 95 | 0 | 25 | 514 | 55493 | 55982 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 133393 | 905 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 12326442 | 12326442 | PRJNA864829_S_NODE_6030_length_246_cov_2.157360_g5944_i0 | PRJNA864829 | 6030 | 246 | 2.15736 | 5.3071056 | Micrococcus lylae | 1273 | Bacteria | Bacteria | 455 | 1.4500000000000002e-123 | NTclustered | gi|2514694063|gb|CP126965.1| | 1273 | g5944 | i0 | 100 | 348.930894308943 | 246 | 0 | 100 | 0 | 1 | 246 | 2594434 | 2594679 | Micrococcus lylae strain UMB0955 chromosome, complete genome | blastn | 85837 | 455 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Micrococcus | Micrococcus lylae | ||
| 12716447 | 12716447 | PRJNA864829_S_NODE_2650_length_330_cov_4.338078_g2564_i0 | PRJNA864829 | 2650 | 330 | 4.338078 | 14.3156574 | Mycobacterium | 1763 | Bacteria | Bacteria | 560 | 4.17e-155 | NTclustered | gi|2272050690|gb|ON993287.1| | 1785 | g2564 | i0 | 100 | 91.7575757575758 | 303 | 0 | 92 | 0 | 27 | 329 | 22 | 324 | Mycobacterium sp. strain #211 16S ribosomal RNA gene, partial sequence | blastn | 30280 | 560 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium sp. | ||
| 13990763 | 13990763 | PRJNA864829_S_NODE_771_length_530_cov_6.357588_g688_i0 | PRJNA864829 | 771 | 530 | 6.357588 | 33.6952164 | Mycobacterium | 1763 | Bacteria | Bacteria | 841 | 0 | NTclustered | gi|2207589223|gb|CP060015.1| | 1780 | g688 | i0 | 95.283 | 151.096226415094 | 530 | 25 | 100 | 0 | 1 | 530 | 3810225 | 3810754 | Mycobacterium malmoense strain DSM 44163 chromosome, complete genome | blastn | 80081 | 841 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium malmoense | ||
| 13990768 | 13990768 | PRJNA864829_S_NODE_9791_length_201_cov_1.368421_g9705_i0 | PRJNA864829 | 9791 | 201 | 1.368421 | 2.75052621 | Gardnerella | 2701 | Bacteria | Bacteria | 366 | 5.5e-97 | NTclustered | gi|470485651|ref|NR_076711.1| | 2702 | g9705 | i0 | 99.502 | 175.800995024876 | 201 | 1 | 100 | 0 | 1 | 201 | 1377 | 1577 | Gardnerella vaginalis strain 409-05 23S ribosomal RNA gene, complete sequence | blastn | 35336 | 366 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Gardnerella vaginalis | ||
| 14875309 | 14875309 | PRJNA864829_S_NODE_6032_length_246_cov_2.045685_g5946_i0 | PRJNA864829 | 6032 | 246 | 2.045685 | 5.0323851 | Mycobacterium senriense | 2775496 | Bacteria | Bacteria | 233 | 7.39e-57 | NTclustered | gi|2065566933|dbj|AP024828.1| | 2775496 | g5946 | i0 | 83.951 | 24.0162601626016 | 243 | 39 | 99 | 0 | 4 | 246 | 1228623 | 1228865 | Mycobacterium sp. TY59 DNA, complete genome | blastn | 5908 | 233 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium senriense | ||
| 15264771 | 15264771 | PRJNA864829_S_NODE_14192_length_171_cov_1.762295_g14106_i0 | PRJNA864829 | 14192 | 171 | 1.762295 | 3.01352445 | root | 1 | Root_unresolved | Root_unresolved | 311 | 2.14e-80 | NTclustered | gi|2660106423|gb|CP138905.1| | 1831 | g14106 | i0 | 99.415 | 410.888888888889 | 171 | 1 | 100 | 0 | 1 | 171 | 559248 | 559418 | MAG: Rhodococcus sp. (in: high G+C Gram-positive bacteria) isolate 1088c chromosome | blastn | 70262 | 311 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Nocardiaceae | Rhodococcus | Rhodococcus sp. (in: high G+C Gram-positive bacteria) | ||
| 16539424 | 16539424 | PRJNA864829_S_NODE_14713_length_169_cov_1.283333_g14627_i0 | PRJNA864829 | 14713 | 169 | 1.283333 | 2.16883277 | Mycobacterium | 1763 | Bacteria | Bacteria | 185 | 1.33e-42 | NTclustered | gi|1937018345|gb|CP065047.1| | 120959 | g14627 | i0 | 86.391 | 9.85207100591716 | 169 | 23 | 100 | 0 | 1 | 169 | 4617696 | 4617528 | Mycobacterium kubicae strain JCM 13573 chromosome, complete genome | blastn | 1665 | 185 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium kubicae | ||
| 16539435 | 16539435 | PRJNA864829_S_NODE_4913_length_266_cov_2.566820_g4827_i0 | PRJNA864829 | 4913 | 266 | 2.56682 | 6.8277412 | Cutibacterium | 1912216 | Bacteria | Bacteria | 492 | 1.2099999999999999e-134 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g4827 | i0 | 100 | 264.078947368421 | 266 | 0 | 100 | 0 | 1 | 266 | 56547 | 56282 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 70245 | 492 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 16539440 | 16539440 | PRJNA864829_S_NODE_6913_length_233_cov_1.902174_g6827_i0 | PRJNA864829 | 6913 | 233 | 1.902174 | 4.43206542 | Micromonospora | 1873 | Bacteria | Bacteria | 132 | 2.6e-26 | NTclustered | gi|2660082824|gb|CP109472.1| | 291594 | g6827 | i0 | 80.114 | 21.2961373390558 | 176 | 35 | 76 | 0 | 52 | 227 | 5197230 | 5197055 | Micromonospora rifamycinica strain NBC_01461 chromosome, complete genome | blastn | 4962 | 132 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micromonosporales | Micromonosporaceae | Micromonospora | Micromonospora rifamycinica | ||
| 17425491 | 17425491 | PRJNA864829_S_NODE_7334_length_227_cov_1.960674_g7248_i0 | PRJNA864829 | 7334 | 227 | 1.960674 | 4.45072998 | Mycobacterium kubicae | 120959 | Bacteria | Bacteria | 300 | 6.54e-77 | NTclustered | gi|1937018345|gb|CP065047.1| | 120959 | g7248 | i0 | 90.667 | 98.6784140969163 | 225 | 21 | 99 | 0 | 3 | 227 | 5871339 | 5871563 | Mycobacterium kubicae strain JCM 13573 chromosome, complete genome | blastn | 22400 | 300 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium kubicae | ||
| 19973878 | 19973878 | PRJNA864829_S_NODE_15716_length_165_cov_1.387931_g15630_i0 | PRJNA864829 | 15716 | 165 | 1.387931 | 2.29008615 | Mycolicibacterium moriokaense | 39691 | Bacteria | Bacteria | 69.4 | 1.37e-7 | NTclustered | gi|1806209106|dbj|AP022560.1| | 39691 | g15630 | i0 | 80.899 | 0.539393939393939 | 89 | 15 | 53 | 2 | 31 | 118 | 5233070 | 5233157 | Mycolicibacterium moriokaense JCM 6375 DNA, complete genome | blastn | 89 | 69.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium moriokaense | ||
| 20363229 | 20363229 | PRJNA864829_S_NODE_12436_length_181_cov_3.257576_g12350_i0 | PRJNA864829 | 12436 | 181 | 3.257576 | 5.89621256 | Cutibacterium | 1912216 | Bacteria | Bacteria | 329 | 6.340000000000001e-86 | NTclustered | gi|1446500593|gb|CP031442.1| | 1747 | g12350 | i0 | 99.448 | 290.624309392265 | 181 | 1 | 100 | 0 | 1 | 181 | 56298 | 56118 | Cutibacterium acnes strain KCOM 1315 chromosome, complete genome | blastn | 52603 | 329 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 20363230 | 20363230 | PRJNA864829_S_NODE_13176_length_177_cov_1.023438_g13090_i0 | PRJNA864829 | 13176 | 177 | 1.023438 | 1.81148526 | PVC group | 1783257 | Bacteria | Bacteria | 58.4 | 3.21e-4 | NTclustered | gi|2452059386|gb|CP118972.1| | 1670 | g13090 | i0 | 97.143 | 0.423728813559322 | 35 | 0 | 20 | 1 | 114 | 148 | 1046518 | 1046485 | Arthrobacter citreus strain DSM 15046 chromosome, complete genome | blastn | 75 | 58.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Micrococcaceae | Arthrobacter | Arthrobacter citreus | ||
| 21249416 | 21249416 | PRJNA864829_S_NODE_10177_length_198_cov_1.449664_g10091_i0 | PRJNA864829 | 10177 | 198 | 1.449664 | 2.87033472 | Corynebacterium matruchotii | 43768 | Bacteria | Bacteria | 52.8 | 0.017 | NTclustered | gi|1540233514|emb|LR134504.1| | 43768 | g10091 | i0 | 100 | 0.282828282828283 | 28 | 0 | 14 | 0 | 117 | 144 | 2042681 | 2042708 | Corynebacterium matruchotii strain NCTC10206 genome assembly, chromosome: 1 | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Corynebacteriaceae | Corynebacterium | Corynebacterium matruchotii | ||
| 21638901 | 21638901 | PRJNA864829_S_NODE_13077_length_177_cov_2.710938_g12991_i0 | PRJNA864829 | 13077 | 177 | 2.710938 | 4.79836026 | Cutibacterium | 1912216 | Bacteria | Bacteria | 285 | 1.3499999999999998e-72 | NTclustered | gi|1898669123|emb|LR588480.1| | 1747 | g12991 | i0 | 100 | 195.734463276836 | 154 | 0 | 87 | 0 | 1 | 154 | 335 | 182 | Cutibacterium acnes partial 16S rRNA gene, isolate PD1MD | blastn | 34645 | 285 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Cutibacterium | Cutibacterium acnes | ||
| 21638921 | 21638921 | PRJNA864829_S_NODE_9537_length_203_cov_2.084416_g9451_i0 | PRJNA864829 | 9537 | 203 | 2.084416 | 4.23136448 | Gardnerella | 2701 | Bacteria | Bacteria | 375 | 9.24e-100 | NTclustered | gi|470485651|ref|NR_076711.1| | 2702 | g9451 | i0 | 100 | 160.088669950739 | 203 | 0 | 100 | 0 | 1 | 203 | 528 | 326 | Gardnerella vaginalis strain 409-05 23S ribosomal RNA gene, complete sequence | blastn | 32498 | 375 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Bifidobacteriales | Bifidobacteriaceae | Gardnerella | Gardnerella vaginalis | ||
| 22914556 | 22914556 | PRJNA864829_S_NODE_2418_length_341_cov_2.520548_g2332_i0 | PRJNA864829 | 2418 | 341 | 2.520548 | 8.59506868 | Mycobacteriaceae | 1762 | Bacteria | Bacteria | 307 | 6.230000000000001e-79 | NTclustered | gi|1003466887|gb|CP014475.1| | 1771 | g2332 | i0 | 82.991 | 112.354838709677 | 341 | 56 | 99 | 2 | 2 | 341 | 4427384 | 4427045 | Mycolicibacterium phlei strain CCUG 21000, complete genome | blastn | 38313 | 309 | 0.993527508090615 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycolicibacterium | Mycolicibacterium phlei | ||
| 23799540 | 23799540 | PRJNA864829_S_NODE_4099_length_284_cov_1.144681_g4013_i0 | PRJNA864829 | 4099 | 284 | 1.144681 | 3.25089404 | Mycobacterium malmoense | 1780 | Bacteria | Bacteria | 387 | 6.329999999999998e-103 | NTclustered | gi|2207589223|gb|CP060015.1| | 1780 | g4013 | i0 | 91.197 | 91.8485915492958 | 284 | 25 | 100 | 0 | 1 | 284 | 4855302 | 4855019 | Mycobacterium malmoense strain DSM 44163 chromosome, complete genome | blastn | 26085 | 387 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium malmoense | ||
| 23799548 | 23799548 | PRJNA864829_S_NODE_5859_length_249_cov_1.460000_g5773_i0 | PRJNA864829 | 5859 | 249 | 1.46 | 3.6354 | Agrococcus sp. Marseille-Q4369 | 2810513 | Bacteria | Bacteria | 71.3 | 6.22e-8 | NTclustered | gi|2033719743|gb|CP070501.1| | 2810513 | g5773 | i0 | 79.091 | 0.634538152610442 | 110 | 18 | 43 | 5 | 143 | 249 | 546522 | 546415 | Agrococcus sp. Marseille-Q4369 chromosome, complete genome | blastn | 158 | 71.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Agrococcus | Agrococcus sp. Marseille-Q4369 | ||
| 23799556 | 23799556 | PRJNA864829_S_NODE_6819_length_234_cov_3.470270_g6733_i0 | PRJNA864829 | 6819 | 234 | 3.47027 | 8.1204318 | Mycobacterium shinjukuense | 398694 | Bacteria | Bacteria | 207 | 4.23e-49 | NTclustered | gi|2714666978|emb|OY970454.1| | 398694 | g6733 | i0 | 82.969 | 6.41025641025641 | 229 | 39 | 98 | 0 | 6 | 234 | 3288890 | 3288662 | Mycobacterium shinjukuense strain DSM 45663 genome assembly, chromosome: Mshi_45663 | blastn | 1500 | 207 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium shinjukuense | ||
| 24188410 | 24188410 | PRJNA864829_S_NODE_9159_length_207_cov_1.303797_g9073_i0 | PRJNA864829 | 9159 | 207 | 1.303797 | 2.69885979 | Mycobacterium | 1763 | Bacteria | Bacteria | 171 | 4.79e-38 | NTclustered | gi|2646819344|gb|CP141297.1| | 78331 | g9073 | i0 | 83.422 | 85.5748792270531 | 187 | 28 | 89 | 3 | 23 | 207 | 1752587 | 1752402 | Mycobacterium canetti strain ET1291 chromosome, complete genome | blastn | 17714 | 171 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium canetti | ||
| 25073355 | 25073355 | PRJNA864829_S_NODE_11960_length_185_cov_1.191176_g11874_i0 | PRJNA864829 | 11960 | 185 | 1.191176 | 2.2036756 | Leifsonia sp. WHRI 6310E | 3162562 | Bacteria | Bacteria | 342 | 8.369999999999999e-90 | NTclustered | gi|2801868331|gb|CP168169.1| | 3162562 | g11874 | i0 | 100 | 186.8 | 185 | 0 | 100 | 0 | 1 | 185 | 171656 | 171840 | Leifsonia sp. WHRI 6310E chromosome, complete genome | blastn | 34558 | 342 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Leifsonia | Leifsonia sp. WHRI 6310E | ||
| 25463550 | 25463550 | PRJNA864829_S_NODE_12820_length_179_cov_1.330769_g12734_i0 | PRJNA864829 | 12820 | 179 | 1.330769 | 2.38207651 | Mycobacterium | 1763 | Bacteria | Bacteria | 250 | 5.01e-62 | NTclustered | gi|1950629173|dbj|AP024245.1| | 1767 | g12734 | i0 | 92.529 | 97.5530726256983 | 174 | 13 | 97 | 0 | 5 | 178 | 3591050 | 3591223 | Mycobacterium intracellulare strain M006 | blastn | 17462 | 252 | 0.992063492063492 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Mycobacteriales | Mycobacteriaceae | Mycobacterium | Mycobacterium intracellulare | ||
| 25463562 | 25463562 | PRJNA864829_S_NODE_6020_length_246_cov_2.609137_g5934_i0 | PRJNA864829 | 6020 | 246 | 2.609137 | 6.41847702 | Actinomycetes | 1760 | Bacteria | Bacteria | 137 | 5.96e-28 | NTclustered | gi|1085753892|emb|LT629732.1| | 117157 | g5934 | i0 | 89.091 | 190.861788617886 | 110 | 12 | 45 | 0 | 137 | 246 | 1488518 | 1488627 | Actinopolymorpha singaporensis strain DSM 22024 genome assembly, chromosome: I | blastn | 46952 | 137 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Actinopolymorphaceae | Actinopolymorpha | Actinopolymorpha singaporensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;