RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA864829" and tax_clade = "Apusozoa"

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tax_superkingdom 1

tax_clade 1

  • Apusozoa · 7 ✖

bioproject 1

  • PRJNA864829 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3398013 3398013 PRJNA864829_S_NODE_3003_length_317_cov_1.309701_g2917_i0 PRJNA864829 3003 317 1.309701 4.15175217 Thecamonas trahens 529818 Root_unresolved Root_unresolved 351 2.61e-92   NTclustered gi|761380055|ref|NC_026452.1| 529818 g2917 i0 88.737 59.9747634069401 293 25 91 5 21 310 923 636 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 19012 351 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
12326422 12326422 PRJNA864829_S_NODE_1910_length_372_cov_1.928793_g1824_i0 PRJNA864829 1910 372 1.928793 7.17510996 Karpovia croatica 2925417 Root_unresolved Root_unresolved 130 1.59e-25   NTclustered gi|2206682173|gb|OM966646.1| 2925417 g1824 i0 84.615 26.744623655914 130 20 35 0 190 319 5868 5739 Karpovia croatica strain CRO19P6 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 9949 130 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Karpovia Karpovia croatica
12326431 12326431 PRJNA864829_S_NODE_3770_length_292_cov_1.572016_g3684_i0 PRJNA864829 3770 292 1.572016 4.59028672 uncultured Apusomonadidae 1675541 Root_unresolved Root_unresolved 292 1.46e-74   NTclustered gi|1110843318|gb|KY077731.1| 1675541 g3684 i0 87.259 62.3253424657534 259 30 88 3 1 256 864 606 Uncultured Apusomonadidae clone Apu_SA-7 18S ribosomal RNA gene, partial sequence blastn 18199 292 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae   uncultured Apusomonadidae
13600993 13600993 PRJNA864829_S_NODE_5871_length_248_cov_10.115578_g5785_i0 PRJNA864829 5871 248 10.115578 25.08663344 Apusomonas proboscidea 41120 Root_unresolved Root_unresolved 320 5.57e-83   NTclustered gi|2206682169|gb|OM966642.1| 41120 g5785 i0 95.5 80.7782258064516 200 9 81 0 24 223 5268 5467 Apusomonas proboscidea strain MPSANABRIA15 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20033 320 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Apusomonas Apusomonas proboscidea
14875265 14875265 PRJNA864829_S_NODE_10712_length_193_cov_8.090278_g10626_i0 PRJNA864829 10712 193 8.090278 15.61423654 Singekia franciliensis 2925418 Root_unresolved Root_unresolved 217 5.5799999999999996e-52   NTclustered gi|2206682165|gb|OM966638.1| 2925418 g10626 i0 87.179 101.119170984456 195 19 99 5 1 191 5126 5318 Singekia franciliensis strain ORSAYFEB19APU1 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19516 217 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia franciliensis
21249417 21249417 PRJNA864829_S_NODE_10477_length_195_cov_4.376712_g10391_i0 PRJNA864829 10477 195 4.376712 8.5345884 Singekia montserratensis 2925341 Root_unresolved Root_unresolved 182 2.06e-41   NTclustered gi|2206682174|gb|OM966647.1| 2925341 g10391 i0 86.471 87.8923076923077 170 18 87 4 2 170 3382 3217 Singekia montserratensis strain MONTSE19P8 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 17139 182 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Singekia Singekia montserratensis
25073373 25073373 PRJNA864829_S_NODE_3280_length_307_cov_1.166667_g3194_i0 PRJNA864829 3280 307 1.166667 3.58166769 Thecamonas trahens 529818 Root_unresolved Root_unresolved 237 7.37e-58   NTclustered gi|761380055|ref|NC_026452.1| 529818 g3194 i0 89.005 63.6514657980456 191 21 62 0 16 206 1693 1503 Thecamonas trahens strain ATCC 50062 mitochondrion, complete genome blastn 19541 237 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;