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contig_metadata

10 rows where analysis = "blastn", bioproject = "PRJNA864829" and tax_clade = "Amoebozoa"

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tax_phylum 3

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 10 ✖

bioproject 1

  • PRJNA864829 · 10 ✖

analysis 1

  • blastn · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2122657 2122657 PRJNA864829_S_NODE_4222_length_281_cov_2.008621_g4136_i0 PRJNA864829 4222 281 2.008621 5.64422501 Paravannella minima 1443144 Discosea other_Eukaryota 520 5.909999999999999e-143   NTclustered gi|571331048|gb|KF895375.1| 1443144 g4136 i0 100 97.3487544483986 281 0 100 0 1 281 429 149 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 27355 520 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
3398024 3398024 PRJNA864829_S_NODE_4483_length_275_cov_3.004425_g4397_i0 PRJNA864829 4483 275 3.004425 8.26216875 Paravannella minima 1443144 Discosea other_Eukaryota 462 9.85e-126   NTclustered gi|571331048|gb|KF895375.1| 1443144 g4397 i0 100 12.4290909090909 250 0 91 0 26 275 644 893 Paravannella minima strain CCAP 1533/1 18S ribosomal RNA gene, partial sequence blastn 3418 462 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Paravannella Paravannella minima
7225491 7225491 PRJNA864829_S_NODE_6366_length_241_cov_2.171875_g6280_i0 PRJNA864829 6366 241 2.171875 5.23421875 Coremiostelium polycephalum 142831 Evosea other_Eukaryota 84.2 7.69e-12   NTclustered gi|85062629|gb|DQ340387.1| 142831 g6280 i0 96.078 5.21576763485477 51 2 21 0 34 84 15605 15655 Dictyostelium polycephalum 17S ribosomal RNA, 5.8S ribosomal RNA, and 26S ribosomal RNA genes, complete sequence blastn 1257 84.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales   Coremiostelium Coremiostelium polycephalum
7225493 7225493 PRJNA864829_S_NODE_6646_length_237_cov_1.468085_g6560_i0 PRJNA864829 6646 237 1.468085 3.47936145 Angulamoeba sp. FN806 1654985 Evosea other_Eukaryota 222 1.53e-53   NTclustered gi|821394117|gb|KP864086.1| 1654985 g6560 i0 85.915 23.2447257383966 213 24 89 6 1 210 804 595 Angulamoeba sp. FN806 small subunit ribosomal RNA gene, partial sequence blastn 5509 222 1 Eukaryota Amoebozoa   Evosea Variosea     Angulamoeba Angulamoeba sp. FN806
13600947 13600947 PRJNA864829_S_NODE_1331_length_429_cov_14.194737_g1245_i0 PRJNA864829 1331 429 14.194737 60.89542173 Ceratiomyxella tahitiensis 661162 Evosea other_Eukaryota 425 2.1199999999999998e-114   NTclustered gi|254679474|gb|FJ544419.1| 661162 g1245 i0 84.828 100.39627039627 435 53 99 12 3 429 587 1016 Ceratiomyxella tahitiensis isolate HI04-93-l-1 18S ribosomal RNA gene, partial sequence blastn 43070 425 1 Eukaryota Amoebozoa   Evosea Variosea Fractovitellida Schizoplasmodiidae Ceratiomyxella Ceratiomyxella tahitiensis
13600972 13600972 PRJNA864829_S_NODE_3671_length_295_cov_1.077236_g3585_i0 PRJNA864829 3671 295 1.077236 3.1778462 Vannella sp. 1973054 Discosea other_Eukaryota 510 3.76e-140   NTclustered gi|2806326588|gb|PQ345838.1| 1973054 g3585 i0 97.966 90.3491525423729 295 5 100 1 1 295 388 95 Vannella sp. isolate 346_1c small subunit ribosomal RNA gene, partial sequence blastn 26653 510 1 Eukaryota Amoebozoa   Discosea Flabellinia   Vannellidae Vannella Vannella sp.
14875296 14875296 PRJNA864829_S_NODE_3792_length_291_cov_3.719008_g3706_i0 PRJNA864829 3792 291 3.719008 10.82231328 Phalansterium filosum 857046 Evosea other_Eukaryota 156 1.9999999999999998e-33   NTclustered gi|300078501|gb|GU001163.1| 857046 g3706 i0 80.275 48.3264604810997 218 34 73 9 55 267 2631 2844 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14063 156 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
18698610 18698610 PRJNA864829_S_NODE_2515_length_337_cov_2.218750_g2429_i0 PRJNA864829 2515 337 2.21875 7.4771875 Dictyostelium purpureum 5786 Evosea other_Eukaryota 69.4 3.16e-7   NTclustered gi|167843288|gb|EU339291.1| 5786 g2429 i0 89.286 0.27893175074184 56 4 17 1 16 71 1063 1116 Dictyostelium purpureum strain WS321 tRNA-Pro gene, complete sequence; ATPase subunit 9 (atp9) gene, complete cds; and large subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 94 69.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
21249436 21249436 PRJNA864829_S_NODE_2157_length_356_cov_20.198697_g2071_i0 PRJNA864829 2157 356 20.198697 71.90736132 Phalansterium filosum 857046 Evosea other_Eukaryota 132 4.21e-26   NTclustered gi|300078501|gb|GU001163.1| 857046 g2071 i0 95.238 20.0505617977528 84 2 42 2 1 83 2834 2916 Phalansterium sp. EEG-2010/THA 5.8S ribosomal RNA gene, partial sequence; internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 7138 132 1 Eukaryota Amoebozoa   Evosea Variosea     Phalansterium Phalansterium filosum
25073376 25073376 PRJNA864829_S_NODE_3880_length_289_cov_2.995833_g3794_i0 PRJNA864829 3880 289 2.995833 8.65795737 Vermamoeba vermiformis 5778 Tubulinea other_Eukaryota 137 7.18e-28   NTclustered gi|909719647|gb|KT185627.1| 5778 g3794 i0 84.028 52.6193771626298 144 21 49 2 4 146 19821 19679 Vermamoeba vermiformis isolate BCP-EM3VF21-2 mitochondrion, complete genome blastn 15207 137 1 Eukaryota Amoebozoa   Tubulinea Echinamoebida     Vermamoeba Vermamoeba vermiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;