RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA861969" and tax_clade = "Discoba"

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tax_superkingdom 1

tax_phylum 1

tax_clade 1

  • Discoba · 2 ✖

bioproject 1

  • PRJNA861969 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11050275 11050275 PRJNA861969_P_NODE_40009_length_242_cov_1.822485_g39778_i0 PRJNA861969 40009 242 1.822485 4.4104137 Heterolobosea sp. 1892890 Heterolobosea other_Eukaryota 372 1.47e-98   NTclustered gi|1059971678|gb|KT892700.1| 1892890 g39778 i0 94.937 57.5537190082645 237 12 98 0 6 242 909 673 Heterolobosea sp. strain B1 18S ribosomal RNA gene, partial sequence blastn 13928 372 1 Eukaryota Discoba   Heterolobosea         Heterolobosea sp.
17424431 17424431 PRJNA861969_P_NODE_24474_length_278_cov_1.278049_g24243_i0 PRJNA861969 24474 278 1.278049 3.55297622 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 350 8.100000000000001e-92   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g24243 i0 89.781 37.1438848920863 274 27 98 1 1 273 2038 2311 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10326 350 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;