RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "blastn", bioproject = "PRJNA859990" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA859990 · 6 ✖

analysis 1

  • blastn · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2511691 2511691 PRJNA859990_S_NODE_3982_length_479_cov_1.403941_g3723_i0 PRJNA859990 3982 479 1.403941 6.72487739 Heterosporis 157917 Fungi Fungi 514 4.95e-141   NTclustered gi|448278452|gb|KC137548.1| 1289055 g3723 i0 88.426 22.8997912317328 432 43 89 6 50 477 2179 2607 Heterosporis sp. NBDP-2013a isolate MN/WAE small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 10969 514 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
4674237 4674237 PRJNA859990_S_NODE_10404_length_315_cov_2.119835_g10143_i0 PRJNA859990 10404 315 2.119835 6.67748025 Heterosporis anguillarum 184033 Fungi Fungi 374 5.539999999999998e-99   NTclustered gi|27448231|gb|AF387331.1| 184033 g10143 i0 90.78 39.7206349206349 282 23 89 3 12 292 1912 2191 Heterosporis anguillarum small subunit ribosomal RNA gene, internal transcribed spacer, and large subunit ribosomal RNA gene, complete sequence blastn 12512 374 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis anguillarum
7224057 7224057 PRJNA859990_S_NODE_16566_length_258_cov_1.832432_g16305_i0 PRJNA859990 16566 258 1.832432 4.72767456 Ecytonucleospora hepatopenaei 646526 Fungi Fungi 263 9.97e-66   NTclustered gi|2522768008|gb|OR162445.1| 646526 g16305 i0 87.5 5.32558139534884 232 24 89 5 4 232 2185 1956 Enterocytozoon hepatopenaei strain SHFX2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1374 263 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Ecytonucleospora Ecytonucleospora hepatopenaei
9774027 9774027 PRJNA859990_S_NODE_4868_length_440_cov_5.662125_g4607_i0 PRJNA859990 4868 440 5.662125 24.91335 Pseudoloma neurophilia 146866 Fungi Fungi 813 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g4607 i0 100 98.85 440 0 100 0 1 440 889 1328 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 43494 813 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia
13599510 13599510 PRJNA859990_S_NODE_12091_length_296_cov_1.511211_g11830_i0 PRJNA859990 12091 296 1.511211 4.47318456 Vavraia culicis 103449 Fungi Fungi 363 1.1199999999999999e-95   NTclustered gi|667636757|ref|XR_552273.1| 948595 g11830 i0 89.86 17.347972972973 286 23 95 6 14 295 765 1048 Vavraia culicis subsp. floridensis 28S ribosomal RNA (VCUG_02832), partial rRNA blastn 5135 363 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Vavraia Vavraia culicis
18697371 18697371 PRJNA859990_S_NODE_835_length_914_cov_3.718193_g643_i0 PRJNA859990 835 914 3.718193 33.98428402 Pseudoloma neurophilia 146866 Fungi Fungi 1568 0   NTclustered gi|11993647|gb|AF322654.1| 146866 g643 i0 99.65 90.0251641137856 856 3 94 0 59 914 2 857 Pseudoloma neurophilia small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 82283 1568 1 Eukaryota Opisthokonta Fungi Microsporidia       Pseudoloma Pseudoloma neurophilia

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;