contig_metadata
7 rows where analysis = "blastn", bioproject = "PRJNA859990" and tax_clade = "PVC group"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 845790 | 845790 | PRJNA859990_S_NODE_12421_length_293_cov_0.954545_g12160_i0 | PRJNA859990 | 12421 | 293 | 0.954545 | 2.79681685 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 422 | 1.7999999999999996e-113 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g12160 | i0 | 95.131 | 132.286689419795 | 267 | 13 | 91 | 0 | 27 | 293 | 7052359 | 7052625 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 38760 | 422 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 7224070 | 7224070 | PRJNA859990_S_NODE_18106_length_250_cov_1.502825_g17845_i0 | PRJNA859990 | 18106 | 250 | 1.502825 | 3.7570625 | uncultured Planctomycetota bacterium | 120965 | Bacteria | Bacteria | 346 | 9.269999999999999e-91 | NTclustered | gi|2874254043|emb|OY970367.1| | 120965 | g17845 | i0 | 91.667 | 126.276 | 252 | 18 | 100 | 3 | 1 | 250 | 3454599 | 3454349 | MAG: uncultured Planctomycetota bacterium isolate MFD04580.bin.c.2 genome assembly, chromosome: 1 | blastn | 31569 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | uncultured Planctomycetota bacterium | |||||
| 9773897 | 9773897 | PRJNA859990_S_NODE_15488_length_266_cov_1.559585_g15227_i0 | PRJNA859990 | 15488 | 266 | 1.559585 | 4.1484961 | Tuwongella immobilis | 692036 | Bacteria | Bacteria | 481 | 2.62e-131 | NTclustered | gi|1804913728|emb|LR593887.1| | 692036 | g15227 | i0 | 99.248 | 50.8195488721804 | 266 | 2 | 100 | 0 | 1 | 266 | 2737478 | 2737213 | Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 | blastn | 13518 | 481 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis | |
| 9773927 | 9773927 | PRJNA859990_S_NODE_17748_length_251_cov_1.556180_g17487_i0 | PRJNA859990 | 17748 | 251 | 1.55618 | 3.9060118 | Tuwongella immobilis | 692036 | Bacteria | Bacteria | 464 | 2.47e-126 | NTclustered | gi|1804913728|emb|LR593887.1| | 692036 | g17487 | i0 | 100 | 112.286852589641 | 251 | 0 | 100 | 0 | 1 | 251 | 2737985 | 2737735 | Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 | blastn | 28184 | 464 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis | |
| 18697145 | 18697145 | PRJNA859990_S_NODE_10135_length_319_cov_0.991870_g9874_i0 | PRJNA859990 | 10135 | 319 | 0.99187 | 3.1640653 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 383 | 9.34e-102 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g9874 | i0 | 91.727 | 102.648902821317 | 278 | 20 | 87 | 3 | 1 | 276 | 4959709 | 4959985 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 32745 | 383 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 22522529 | 22522529 | PRJNA859990_S_NODE_10358_length_316_cov_1.111111_g10097_i0 | PRJNA859990 | 10358 | 316 | 1.111111 | 3.51111076 | Singulisphaera sp. Ch08 | 3120278 | Bacteria | Bacteria | 398 | 3.3e-106 | NTclustered | gi|2732846650|gb|CP155447.1| | 3120278 | g10097 | i0 | 89.655 | 76.0981012658228 | 319 | 24 | 99 | 9 | 1 | 314 | 2272067 | 2271753 | Singulisphaera sp. Ch08 chromosome, complete genome | blastn | 24047 | 398 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Singulisphaera | Singulisphaera sp. Ch08 | |
| 25072141 | 25072141 | PRJNA859990_S_NODE_7600_length_362_cov_0.871972_g7339_i0 | PRJNA859990 | 7600 | 362 | 0.871972 | 3.15653864 | Tuwongella immobilis | 692036 | Bacteria | Bacteria | 641 | 1.5999999999999993e-179 | NTclustered | gi|1804913728|emb|LR593887.1| | 692036 | g7339 | i0 | 98.619 | 102.325966850829 | 362 | 5 | 100 | 0 | 1 | 362 | 2740123 | 2739762 | Tuwongella immobilis isolate MBLW1 genome assembly, chromosome: 1 | blastn | 37042 | 641 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Tuwongella | Tuwongella immobilis |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;