RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA859990" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA859990 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13599496 13599496 PRJNA859990_S_NODE_10931_length_309_cov_0.940678_g10670_i0 PRJNA859990 10931 309 0.940678 2.90669502 Candidatus Saccharibacteria bacterium RAAC3_TM7_1 1394711 Bacteria Bacteria 359 1.52e-94   NTclustered gi|563353835|gb|CP006915.1| 1394711 g10670 i0 88.026 768.990291262136 309 30 99 7 2 309 450907 451209 Candidatus Saccharibacteria bacterium RAAC3_TM7_1, complete genome blastn 237618 359 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
22522618 22522618 PRJNA859990_S_NODE_18298_length_250_cov_0.870056_g18037_i0 PRJNA859990 18298 250 0.870056 2.17514 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17 1619070 Bacteria Bacteria 462 8.83e-126   NTclustered gi|837350690|gb|CP011211.1| 1619070 g18037 i0 100 1 250 0 100 0 1 250 265117 264868 Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17, complete genome blastn 250 462 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium GW2011_GWC2_44_17
25071981 25071981 PRJNA859990_S_NODE_15540_length_266_cov_0.994819_g15279_i0 PRJNA859990 15540 266 0.994819 2.64621854 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 108 5.12e-19   NTclustered gi|1958074337|gb|CP064994.1| 2045217 g15279 i0 90.361 94.5112781954887 83 7 31 1 60 142 427895 427814 MAG: Candidatus Moraniibacteriota bacterium isolate Hirt_18-Q3-R61-65_MAXAC.378_cln chromosome, complete genome blastn 25140 108 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;