RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "blastn", bioproject = "PRJNA857857" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 1 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857857 · 1 ✖

analysis 1

  • blastn · 1 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8497656 8497656 PRJNA857857_P_NODE_17887_length_371_cov_1.550336_g17439_i0 PRJNA857857 17887 371 1.550336 5.75174656 Linderina pennispora 61395 Fungi Fungi 189 2.5799999999999998e-43   NTclustered gi|2028323096|ref|XM_040884732.1| 61395 g17439 i0 83.092 18.4231805929919 207 35 56 0 163 369 1014 808 Linderina pennispora lysyl-tRNA synthetase (DL89DRAFT_225163), partial mRNA blastn 6835 189 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;