RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA857857" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
844967 844967 PRJNA857857_P_NODE_27801_length_293_cov_5.340909_g27352_i0 PRJNA857857 27801 293 5.340909 15.64886337 Umbelopsis ramanniana 41833 Fungi Fungi 176 1.55e-39   NTclustered gi|2323690707|ref|XM_051593736.1| 1314678 g27352 i0 82.297 5.52559726962457 209 32 71 5 34 240 516 311 Umbelopsis ramanniana AG uncharacterized protein (K450DRAFT_301097), mRNA blastn 1619 176 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis ramanniana
4673454 4673454 PRJNA857857_P_NODE_30384_length_280_cov_1.193237_g29935_i0 PRJNA857857 30384 280 1.193237 3.3410636 Zychaea mexicana 64656 Fungi Fungi 241 5.130000000000001e-59   NTclustered gi|2432158646|ref|XM_053123105.1| 64656 g29935 i0 82.734 19.5892857142857 278 41 98 6 1 273 521 246 Zychaea mexicana adenosylhomocysteinase (BDB00DRAFT_817872), mRNA blastn 5485 241 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Zychaea Zychaea mexicana
16147945 16147945 PRJNA857857_P_NODE_42233_length_247_cov_1.178161_g41784_i0 PRJNA857857 42233 247 1.178161 2.91005767 Mucor velutinosus 708070 Fungi Fungi 425 1.14e-114   NTclustered gi|2724886901|ref|XM_064831124.1| 708070 g41784 i0 99.156 21.9757085020243 237 1 96 1 1 236 237 1 Mucor velutinosus uncharacterized protein (ATC70_011941), partial mRNA blastn 5428 425 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Mucor Mucor velutinosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;