RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA857857" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11048918 11048918 PRJNA857857_P_NODE_43789_length_246_cov_0.890173_g43340_i0 PRJNA857857 43789 246 0.890173 2.18982558 Xenia sp. Carnegie-2017 2897299 Cnidaria other_Eukaryota 62.1 3.69e-5   NTclustered gi|2202644047|ref|XM_046995877.1| 2897299 g43340 i0 97.222 0.146341463414634 36 1 15 0 61 96 3666 3631 PREDICTED: Xenia sp. Carnegie-2017 nuclear pore complex protein Nup98-Nup96-like (LOC124445171), mRNA blastn 36 62.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Xeniidae Xenia Xenia sp. Carnegie-2017
19971479 19971479 PRJNA857857_P_NODE_25176_length_310_cov_1.312236_g24727_i0 PRJNA857857 25176 310 1.312236 4.0679316 Rhopilema esculentum 499914 Cnidaria other_Eukaryota 54.7 0.008   NTclustered gi|2729088734|ref|XR_010516542.1| 499914 g24727 i0 100 0.467741935483871 29 0 9 0 13 41 248 220 PREDICTED: Rhopilema esculentum uncharacterized LOC135689669 (LOC135689669), transcript variant X2, misc_RNA blastn 145 54.7 1 Eukaryota Opisthokonta Metazoa Cnidaria Scyphozoa Rhizostomeae Rhizostomatidae Rhopilema Rhopilema esculentum
19972092 19972092 PRJNA857857_P_NODE_8956_length_520_cov_3.060403_g8525_i0 PRJNA857857 8956 520 3.060403 15.9140956 Pocillopora damicornis 46731 Cnidaria other_Eukaryota 235 4.71e-57   NTclustered gi|1524850869|ref|XM_027188359.1| 46731 g8525 i0 81.625 16.1865384615385 283 52 54 0 157 439 400 118 PREDICTED: Pocillopora damicornis histone H2A.V (LOC113672050), mRNA blastn 8417 235 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Pocilloporidae Pocillopora Pocillopora damicornis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;