RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA857857" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA857857 · 8 ✖

analysis 1

  • blastn · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2120568 2120568 PRJNA857857_P_NODE_38542_length_250_cov_0.870056_g38093_i0 PRJNA857857 38542 250 0.870056 2.17514 Paramecium tetraurelia 5888 SAR_Eukaryotes SAR_Eukaryotes 58.4 4.87e-4   NTclustered gi|145512037|ref|XM_001441904.1| 5888 g38093 i0 100 0.124 31 0 12 0 78 108 110 80 Paramecium tetraurelia uncharacterized protein (GSPATT00010745001), partial mRNA blastn 31 58.4 1 Eukaryota Sar   Ciliophora Oligohymenophorea Peniculida Parameciidae Paramecium Paramecium tetraurelia
7223210 7223210 PRJNA857857_P_NODE_31546_length_274_cov_1.422886_g31097_i0 PRJNA857857 31546 274 1.422886 3.89870764 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 285 2.28e-72   NTclustered gi|829170408|ref|XM_001015874.3| 312017 g31097 i0 89.083 0.835766423357664 229 25 84 0 1 229 252 24 Tetrahymena thermophila SB210 40S ribosomal protein S15 partial mRNA blastn 229 285 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
7613576 7613576 PRJNA857857_P_NODE_22486_length_330_cov_0.871595_g22037_i0 PRJNA857857 22486 330 0.871595 2.8762635 Tetrahymena 5890 SAR_Eukaryotes SAR_Eukaryotes 604 1.8999999999999996e-168   NTclustered gi|2624251057|gb|OR858827.1| 5914 g22037 i0 99.697 99.969696969697 330 1 100 0 1 330 1565 1236 Tetrahymena corlissi isolate LLH20220320 small subunit ribosomal RNA gene, partial sequence blastn 32990 610 0.99016393442623 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena corlissi
12324385 12324385 PRJNA857857_P_NODE_38910_length_250_cov_0.870056_g38461_i0 PRJNA857857 38910 250 0.870056 2.17514 Chilodonella uncinata 151077 SAR_Eukaryotes SAR_Eukaryotes 449 6.87e-122   NTclustered gi|21632121|gb|AY041131.1| 151077 g38461 i0 100 96.572 243 0 97 0 1 243 853 1095 Chilodonella uncinata clone 11 alpha-tubulin gene, partial cds blastn 24143 449 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella uncinata
13598831 13598831 PRJNA857857_P_NODE_35031_length_257_cov_2.250000_g34582_i0 PRJNA857857 35031 257 2.25 5.7825 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 364 2.6399999999999993e-96   NTclustered gi|118385632|ref|XM_001025944.1| 312017 g34582 i0 92.218 1 257 20 100 0 1 257 259 515 Tetrahymena thermophila SB210 receptor of activated kinase C 1A, component of 40S small ribosomal subunit partial mRNA blastn 257 364 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
22522045 22522045 PRJNA857857_P_NODE_44598_length_246_cov_0.890173_g44149_i0 PRJNA857857 44598 246 0.890173 2.18982558 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 315 2.57e-81   NTclustered gi|829149595|ref|XM_001009414.3| 312017 g44149 i0 89.837 1 246 24 99 1 1 245 294 49 Tetrahymena thermophila SB210 50S ribosomal protein L1P mRNA blastn 246 315 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23797053 23797053 PRJNA857857_P_NODE_23559_length_322_cov_0.895582_g23110_i0 PRJNA857857 23559 322 0.895582 2.88377404 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 429 1.19e-115   NTclustered gi|829192616|ref|XM_001029813.3| 312017 g23110 i0 93.706 8.49689440993789 286 18 89 0 1 286 286 1 Tetrahymena thermophila SB210 60S ribosomal protein L15 partial mRNA blastn 2736 429 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila
23797614 23797614 PRJNA857857_P_NODE_49639_length_242_cov_0.911243_g49190_i0 PRJNA857857 49639 242 0.911243 2.20520806 Tetrahymena thermophila 5911 SAR_Eukaryotes SAR_Eukaryotes 320 5.41e-83   NTclustered gi|118360339|ref|XM_001013407.1| 312017 g49190 i0 90.795 1.1404958677686 239 22 99 0 4 242 368 130 Tetrahymena thermophila SB210 hypothetical protein partial mRNA blastn 276 320 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida Tetrahymenidae Tetrahymena Tetrahymena thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;