RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA857857" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857857 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8497594 8497594 PRJNA857857_P_NODE_14167_length_419_cov_0.832370_g13720_i0 PRJNA857857 14167 419 0.83237 3.4876303 Hirudo verbana 311461 Annelida Annelida 58.4 8.67e-4   NTclustered gi|2918369621|emb|OZ237783.1| 311461 g13720 i0 90.909 8.33890214797136 44 3 10 1 36 78 686924 686881 Hirudo verbana genome assembly, chromosome: 5 blastn 3494 58.4 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
11048926 11048926 PRJNA857857_P_NODE_44129_length_246_cov_0.890173_g43680_i0 PRJNA857857 44129 246 0.890173 2.18982558 Hirudo verbana 311461 Annelida Annelida 56.5 0.002   NTclustered gi|2918369714|emb|OZ237790.1| 311461 g43680 i0 100 0.121951219512195 30 0 12 0 29 58 5567161 5567132 Hirudo verbana genome assembly, chromosome: 12 blastn 30 56.5 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
15263495 15263495 PRJNA857857_P_NODE_20292_length_347_cov_2.270073_g19843_i0 PRJNA857857 20292 347 2.270073 7.87715331 Metazoa 33208 Annelida Annelida 230 1.4099999999999995e-55   NTclustered gi|86372483|gb|DQ300086.1| 210803 g19843 i0 80.645 88.3832853025937 310 49 88 7 42 347 9 311 Phascolosoma stephensoni isolate DNA100203 histone H3 gene, partial cds blastn 30669 230 1 Eukaryota Opisthokonta Metazoa Annelida Sipuncula Phascolosomatiformes Phascolosomatidae Phascolosoma Phascolosoma stephensoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;