RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857143 · 4 ✖

analysis 1

  • blastn · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2118237 2118237 PRJNA857143_S_NODE_100922_length_312_cov_1.744770_g99829_i0 PRJNA857143 100922 312 1.74477 5.4436824 Linderina pennispora 61395 Fungi Fungi 158 6.01e-34   NTclustered gi|2028319608|ref|XM_040887421.1| 61395 g99829 i0 78.261 29.7179487179487 253 49 80 4 1 250 67 316 Linderina pennispora L30e-like protein (DL89DRAFT_267261), mRNA blastn 9272 158 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora
10163847 10163847 PRJNA857143_S_NODE_192548_length_243_cov_0.917647_g191455_i0 PRJNA857143 192548 243 0.917647 2.22988221 Opisthokonta 33154 Fungi Fungi 54.7 0.006   NTclustered gi|1025731861|gb|KT231805.1| 4864 g191455 i0 100 8.34156378600823 29 0 12 0 2 30 277 305 Coemansia mojavensis strain BCRC34202 28S ribosomal RNA gene, partial sequence blastn 2027 54.7 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Coemansia Coemansia mojavensis
13989162 13989162 PRJNA857143_S_NODE_82731_length_335_cov_1.351145_g81638_i0 PRJNA857143 82731 335 1.351145 4.52633575 Eukaryota 2759 Fungi Fungi 134 1.1e-26   NTclustered gi|82398415|gb|DQ273795.1| 78913 g81638 i0 83.444 17.2686567164179 151 18 44 7 128 276 1787 1642 Rhopalomyces elegans isolate AFTOL-ID 142 28S ribosomal RNA gene, partial sequence blastn 5785 135 0.992592592592593 Eukaryota Opisthokonta Fungi Zoopagomycota Zoopagomycetes Zoopagales Helicocephalidaceae Rhopalomyces Rhopalomyces elegans
23795966 23795966 PRJNA857143_S_NODE_194359_length_242_cov_1.260355_g193266_i0 PRJNA857143 194359 242 1.260355 3.0500591 Linderina pennispora 61395 Fungi Fungi 100 7.68e-17   NTclustered gi|2028317086|ref|XM_040885076.1| 61395 g193266 i0 86.667 2.75619834710744 90 12 37 0 3 92 885 974 Linderina pennispora transaldolase (DL89DRAFT_244893), partial mRNA blastn 667 100 1 Eukaryota Opisthokonta Fungi Zoopagomycota Kickxellomycetes Kickxellales Kickxellaceae Linderina Linderina pennispora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;