contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2510805 | 2510805 | PRJNA857143_S_NODE_112782_length_299_cov_2.641593_g111689_i0 | PRJNA857143 | 112782 | 299 | 2.641593 | 7.89836307 | Myxococcales | 29 | Bacteria | Bacteria | 448 | 3.03e-121 | NTclustered | gi|827418478|gb|CP011509.1| | 48 | g111689 | i0 | 93.96 | 386.976588628763 | 298 | 15 | 99 | 3 | 2 | 297 | 1062875 | 1062579 | Archangium gephyra strain DSM 2261, complete genome | blastn | 115706 | 451 | 0.993348115299335 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 3394701 | 3394701 | PRJNA857143_S_NODE_40363_length_423_cov_4.920000_g39271_i0 | PRJNA857143 | 40363 | 423 | 4.92 | 20.8116 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 60.2 | 2.44e-4 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g39271 | i0 | 100 | 0.423167848699764 | 32 | 0 | 8 | 0 | 224 | 255 | 5501189 | 5501220 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 179 | 60.2 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 6339221 | 6339221 | PRJNA857143_S_NODE_112225_length_300_cov_1.374449_g111132_i0 | PRJNA857143 | 112225 | 300 | 1.374449 | 4.123347 | Myxococcus | 32 | Bacteria | Bacteria | 270 | 7.08e-68 | NTclustered | gi|545790940|gb|KF270703.1| | 33 | g111132 | i0 | 83 | 218.443333333333 | 300 | 50 | 100 | 1 | 1 | 300 | 54 | 352 | Myxococcus fulvus strain Mxf428 23S ribosomal RNA gene, partial sequence | blastn | 65533 | 270 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus fulvus | ||
| 9772633 | 9772633 | PRJNA857143_S_NODE_95388_length_318_cov_2.624490_g94295_i0 | PRJNA857143 | 95388 | 318 | 2.62449 | 8.3458782 | Archangium gephyra | 48 | Bacteria | Bacteria | 124 | 6.2299999999999996e-24 | NTclustered | gi|2809295724|gb|CP102578.1| | 48 | g94295 | i0 | 80.864 | 33.5817610062893 | 162 | 27 | 50 | 3 | 125 | 284 | 3759926 | 3759767 | Archangium gephyra strain SDU49 chromosome, complete genome | blastn | 10679 | 124 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium gephyra | ||
| 11046618 | 11046618 | PRJNA857143_S_NODE_116149_length_296_cov_1.457399_g115056_i0 | PRJNA857143 | 116149 | 296 | 1.4573989999999999 | 4.31390104 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 374 | 5.1599999999999986e-99 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g115056 | i0 | 89.404 | 170.114864864865 | 302 | 24 | 99 | 5 | 3 | 296 | 3942562 | 3942261 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 50354 | 374 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 14871515 | 14871515 | PRJNA857143_S_NODE_172312_length_251_cov_5.297753_g171219_i0 | PRJNA857143 | 172312 | 251 | 5.297753 | 13.29736003 | Pendulispora brunnea | 2905690 | Bacteria | Bacteria | 217 | 7.619999999999999e-52 | NTclustered | gi|2698055994|gb|CP089982.1| | 2905690 | g171219 | i0 | 84.305 | 127.215139442231 | 223 | 34 | 90 | 1 | 3 | 224 | 9038004 | 9038226 | Pendulispora brunnea strain MSr12523 chromosome, complete genome | blastn | 31931 | 217 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora brunnea | ||
| 17422358 | 17422358 | PRJNA857143_S_NODE_55494_length_383_cov_1.609677_g54401_i0 | PRJNA857143 | 55494 | 383 | 1.609677 | 6.16506291 | Labilithrix luteola | 1391654 | Bacteria | Bacteria | 638 | 2.2e-178 | NTclustered | gi|913610804|gb|CP012333.1| | 1391654 | g54401 | i0 | 97.09 | 155.1227154047 | 378 | 11 | 99 | 0 | 1 | 378 | 3943845 | 3944222 | Labilithrix luteola strain DSM 27648, complete genome | blastn | 59412 | 638 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Labilitrichaceae | Labilithrix | Labilithrix luteola | |||
| 21245931 | 21245931 | PRJNA857143_S_NODE_197497_length_236_cov_2.803681_g196404_i0 | PRJNA857143 | 197497 | 236 | 2.803681 | 6.61668716 | Archangium violaceum | 83451 | Bacteria | Bacteria | 132 | 2.64e-26 | NTclustered | gi|1981856374|gb|CP069338.1| | 83451 | g196404 | i0 | 81.212 | 7.35593220338983 | 165 | 29 | 69 | 2 | 12 | 175 | 1276883 | 1276720 | Archangium violaceum strain SDU34 chromosome, complete genome | blastn | 1736 | 132 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 24186827 | 24186827 | PRJNA857143_S_NODE_118279_length_294_cov_1.411765_g117186_i0 | PRJNA857143 | 118279 | 294 | 1.411765 | 4.1505891 | Myxococcaceae | 31 | Bacteria | Bacteria | 243 | 1.5100000000000001e-59 | NTclustered | gi|545790945|gb|KF270708.1| | 83456 | g117186 | i0 | 81.757 | 106.697278911565 | 296 | 49 | 100 | 5 | 1 | 294 | 9 | 301 | Myxococcus virescens strain Mxv2 23S ribosomal RNA gene, partial sequence | blastn | 31369 | 243 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcaceae | Myxococcus | Myxococcus virescens |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;