RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857143 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5947263 5947263 PRJNA857143_S_NODE_36525_length_437_cov_1.670330_g35433_i0 PRJNA857143 36525 437 1.67033 7.2993421 Strongylocentrotus purpuratus 7668 Echinodermata other_Eukaryota 65.8 5.42e-6   NTclustered gi|1752336946|ref|XM_030983561.1| 7668 g35433 i0 100 2.64073226544622 35 0 8 0 402 436 7769 7735 PREDICTED: Strongylocentrotus purpuratus E3 ubiquitin-protein ligase HUWE1 (LOC575742), mRNA blastn 1154 65.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Camarodonta Strongylocentrotidae Strongylocentrotus Strongylocentrotus purpuratus
8495759 8495759 PRJNA857143_S_NODE_103587_length_309_cov_1.703390_g102494_i0 PRJNA857143 103587 309 1.70339 5.2634751 Diadema antillarum 105358 Echinodermata other_Eukaryota 54.7 0.008   NTclustered gi|2919412131|ref|XM_071633709.1| 105358 g102494 i0 94.286 0.226537216828479 35 2 11 0 1 35 1580 1614 PREDICTED: Diadema antillarum T-complex protein 1 subunit theta-like (LOC139722418), mRNA blastn 70 54.7 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Diadematoida Diadematidae Diadema Diadema antillarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;