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contig_metadata

27 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Chlorophyta"

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tax_superkingdom 1

tax_phylum 1

  • Chlorophyta · 27 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA857143 · 27 ✖

analysis 1

  • blastn · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2118361 2118361 PRJNA857143_S_NODE_112682_length_299_cov_3.168142_g111589_i0 PRJNA857143 112682 299 3.168142 9.47274458 Micromonas pusilla 38833 Plants Plants 58.4 5.98e-4   NTclustered gi|303272959|ref|XM_003055795.1| 564608 g111589 i0 90.698 0.1438127090301 43 4 14 0 189 231 1714 1672 Micromonas pusilla CCMP1545 uncharacterized protein (MICPUCDRAFT_55007), mRNA blastn 43 58.4 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Micromonas Micromonas pusilla
2510899 2510899 PRJNA857143_S_NODE_97702_length_316_cov_1.152263_g96609_i0 PRJNA857143 97702 316 1.152263 3.64115108 Eukaryota 2759 Plants Plants 100 1.04e-16   NTclustered gi|2082258180|ref|XM_043067316.1| 3055 g96609 i0 98.246 21.0221518987342 57 1 18 0 258 314 822 766 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_11g467567v5), mRNA blastn 6643 100 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
4671991 4671991 PRJNA857143_S_NODE_173304_length_251_cov_1.314607_g172211_i0 PRJNA857143 173304 251 1.314607 3.29966357 Chlorella variabilis 554065 Plants Plants 52.8 0.023   NTclustered gi|552808536|ref|XM_005842698.1| 554065 g172211 i0 100 0.111553784860558 28 0 11 0 186 213 1072 1099 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59474) mRNA, complete cds blastn 28 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
4672764 4672764 PRJNA857143_S_NODE_68684_length_357_cov_1.373239_g67591_i0 PRJNA857143 68684 357 1.373239 4.90246323 Mantoniella tinhauana 3097027 Plants Plants 52.8 0.034   NTclustered gi|2735153280|gb|CP140065.1| 3097027 g67591 i0 100 0.0784313725490196 28 0 8 0 102 129 630619 630646 Mantoniella tinhauana isolate LFS chromosome 4 blastn 28 52.8 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana
4672876 4672876 PRJNA857143_S_NODE_78404_length_341_cov_1.630597_g77311_i0 PRJNA857143 78404 341 1.630597 5.56033577 Chlamydomonas reinhardtii 3055 Plants Plants 220 8.35e-53   NTclustered gi|2082261495|ref|XM_001692933.2| 3055 g77311 i0 85 16.6656891495601 220 29 64 4 4 221 712 929 Chlamydomonas reinhardtii ribosomal protein L8 (CHLRE_12g535851v5), mRNA blastn 5683 220 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5946535 5946535 PRJNA857143_S_NODE_147965_length_268_cov_1.610256_g146872_i0 PRJNA857143 147965 268 1.610256 4.31548608 Volvox carteri 3067 Plants Plants 84.2 8.7e-12   NTclustered gi|302841658|ref|XM_002952328.1| 3068 g146872 i0 91.667 0.223880597014925 60 5 22 0 181 240 729 670 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_62351), partial mRNA blastn 60 84.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
5947381 5947381 PRJNA857143_S_NODE_49005_length_398_cov_5.544615_g47912_i0 PRJNA857143 49005 398 5.544615 22.0675677 Chlamydomonas reinhardtii 3055 Plants Plants 206 2.7599999999999996e-48   NTclustered gi|2082247947|ref|XM_001698013.2| 3055 g47912 i0 78.299 6.84924623115578 341 58 84 14 66 398 942 610 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_06g278222v5), mRNA blastn 2726 206 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
5947448 5947448 PRJNA857143_S_NODE_57145_length_379_cov_2.970588_g56052_i0 PRJNA857143 57145 379 2.970588 11.25852852 Volvox carteri 3067 Plants Plants 230 1.5499999999999996e-55   NTclustered gi|302832853|ref|XM_002947945.1| 3068 g56052 i0 80 13.754617414248001 320 57 84 7 59 375 466 151 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_79846), mRNA blastn 5213 230 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
7222006 7222006 PRJNA857143_S_NODE_201026_length_226_cov_4.169935_g199933_i0 PRJNA857143 201026 226 4.169935 9.4240531 Polytomella sp. Pringsheim 198.80 37502 Plants Plants 394 2.899999999999999e-105   NTclustered gi|430006591|emb|FR750564.1| 37502 g199933 i0 98.23 101.141592920354 226 2 100 1 1 226 2918 2695 Polytomella sp. Pringsheim 198.80 genomic DNA containing 18S rRNA, ITS1, 5S rRNA, ITS2 and 26S rRNA blastn 22858 394 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella sp. Pringsheim 198.80
7613316 7613316 PRJNA857143_S_NODE_174246_length_251_cov_0.876404_g173153_i0 PRJNA857143 174246 251 0.876404 2.19977404 Marvania 97104 Plants Plants 222 1.64e-53   NTclustered gi|2724824493|gb|PP746561.1| 97105 g173153 i0 83.83 61.7888446215139 235 36 93 2 17 250 28638 28871 Marvania geminata culture SAG:12.88 mitochondrion, complete genome blastn 15509 222 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Marvania Marvania geminata
8888260 8888260 PRJNA857143_S_NODE_150227_length_266_cov_2.274611_g149134_i0 PRJNA857143 150227 266 2.274611 6.05046526 Eukaryota 2759 Plants Plants 58.4 5.23e-4   NTclustered gi|302840717|ref|XM_002951860.1| 3068 g149134 i0 100 8.03007518796992 31 0 12 0 200 230 911 941 Volvox carteri f. nagariensis uncharacterized protein (VOLCADRAFT_92549), partial mRNA blastn 2136 58.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox carteri
10163853 10163853 PRJNA857143_S_NODE_201888_length_202_cov_4.232558_g200795_i0 PRJNA857143 201888 202 4.232558 8.54976716 Eukaryota 2759 Plants Plants 132 2.2e-26   NTclustered gi|1861356407|gb|MT377431.1| 51329 g200795 i0 86.957 54.2178217821782 115 15 57 0 1 115 623 737 Polytomella parva clone 0016300141 tubulin alpha chain (TBA) mRNA, complete cds; plastid blastn 10952 132 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Polytomella Polytomella parva
11046497 11046497 PRJNA857143_S_NODE_104729_length_308_cov_1.229787_g103636_i0 PRJNA857143 104729 308 1.229787 3.78774396 Chlamydomonas reinhardtii 3055 Plants Plants 52.8 0.029   NTclustered gi|2082240089|ref|XM_043059935.1| 3055 g103636 i0 100 0.181818181818182 28 0 9 0 1 28 3603 3630 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_02g114001v5), mRNA blastn 56 52.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
11047533 11047533 PRJNA857143_S_NODE_24869_length_494_cov_8.325416_g23780_i0 PRJNA857143 24869 494 8.325416 41.12755504 Prototheca bovis 2509265 Plants Plants 248 5.73e-61   NTclustered gi|1770690688|ref|NC_045058.1| 2509265 g23780 i0 81.29 7.48178137651822 310 54 62 4 1 308 29339 29032 Prototheca zopfii strain SAG 2021 mitochondrion, complete genome blastn 3696 248 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca bovis
13989149 13989149 PRJNA857143_S_NODE_68851_length_356_cov_5.720848_g67758_i0 PRJNA857143 68851 356 5.720848 20.36621888 Eukaryota 2759 Plants Plants 658 0   NTclustered gi|1714003650|gb|MN243923.1| 3079 g67758 i0 100 99.7247191011236 356 0 100 0 1 356 518 873 Chlorella sp. isolate CAVR01 small subunit ribosomal RNA gene, partial sequence blastn 35502 658 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp.
14872233 14872233 PRJNA857143_S_NODE_6492_length_792_cov_7.353268_g5668_i0 PRJNA857143 6492 792 7.353268 58.23788256 Chloroparvula pacifica 1883388 Plants Plants 268 7.249999999999999e-67   NTclustered gi|1693285448|ref|NC_042603.1| 1883388 g5668 i0 79.284 50.209595959596 391 76 49 5 14 401 21761 22149 Chloroparvula pacifica culture RCC:4656 mitochondrion, complete genome blastn 39766 268 1 Eukaryota   Viridiplantae Chlorophyta Chloropicophyceae Chloropicales Chloropicaceae Chloroparvula Chloroparvula pacifica
17422175 17422175 PRJNA857143_S_NODE_36454_length_437_cov_2.755495_g35362_i0 PRJNA857143 36454 437 2.755495 12.04151315 Chlamydomonas reinhardtii 3055 Plants Plants 337 1.0399999999999996e-87   NTclustered gi|2082259086|ref|XM_001697336.2| 3055 g35362 i0 84.751 71.3569794050343 341 47 77 4 100 437 526 188 Chlamydomonas reinhardtii ribosomal protein S14 (CHLRE_11g480150v5), mRNA blastn 31183 337 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
18695585 18695585 PRJNA857143_S_NODE_64075_length_365_cov_3.702055_g62982_i0 PRJNA857143 64075 365 3.702055 13.51250075 Chlorella variabilis 554065 Plants Plants 54.7 0.01   NTclustered gi|552808746|ref|XM_005842723.1| 554065 g62982 i0 100 0.693150684931507 29 0 8 0 196 224 1590 1562 Chlorella variabilis hypothetical protein (CHLNCDRAFT_59466) mRNA, complete cds blastn 253 54.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
19971120 19971120 PRJNA857143_S_NODE_89676_length_325_cov_5.107143_g88583_i0 PRJNA857143 89676 325 5.107143 16.59821475 Prototheca ciferrii 1973153 Plants Plants 143 1.76e-29   NTclustered gi|1381389463|ref|NC_037449.1| 1973153 g88583 i0 80.952 59.9907692307692 189 29 57 6 40 225 20247 20431 Prototheca zopfii strain SAG 2063 mitochondrion, complete genome blastn 19497 143 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Prototheca Prototheca ciferrii
21245976 21245976 PRJNA857143_S_NODE_20937_length_523_cov_2.251111_g19855_i0 PRJNA857143 20937 523 2.251111 11.77331053 Diplosphaera sundellii 3135960 Plants Plants 322 3.54e-83   NTclustered gi|2878821371|gb|PQ563290.1| 3135960 g19855 i0 80.516 80.3441682600382 426 77 81 4 75 497 5820 5398 Diplosphaera sundellii mitochondrion, complete genome blastn 42020 322 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Prasiolales Stichococcaceae Diplosphaera Diplosphaera sundellii
22519525 22519525 PRJNA857143_S_NODE_101778_length_311_cov_1.907563_g100685_i0 PRJNA857143 101778 311 1.907563 5.93252093 Hemiflagellochloris kazakhstanica 361670 Plants Plants 448 3.169999999999999e-121   NTclustered gi|108860513|dbj|AB244245.1| 361670 g100685 i0 92.903 99.9903536977492 310 18 99 3 3 311 1822 1516 Hemiflagellochloris kazakhstanica NIES:1722 gene for 28S rRNA, partial sequence blastn 31097 448 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlorococcaceae Hemiflagellochloris Hemiflagellochloris kazakhstanica
22520905 22520905 PRJNA857143_S_NODE_56338_length_381_cov_2.029221_g55245_i0 PRJNA857143 56338 381 2.029221 7.73133201 Chlamydomonas reinhardtii 3055 Plants Plants 60.2 2.17e-4   NTclustered gi|2082249810|ref|XM_043063891.1| 3055 g55245 i0 100 0.083989501312336 32 0 8 0 65 96 4560 4529 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_07g316900v5), mRNA blastn 32 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
22912948 22912948 PRJNA857143_S_NODE_158298_length_260_cov_2.016043_g157205_i0 PRJNA857143 158298 260 2.016043 5.2417118 Eukaryota 2759 Plants Plants 71.3 6.54e-8   NTclustered gi|2323365043|gb|CP084607.1| 3076 g157205 i0 80.189 5.13846153846154 106 12 38 8 31 128 2714 2610 Chlorella sorokiniana strain SLA-04 chloroplast, complete genome blastn 1336 71.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
22912951 22912951 PRJNA857143_S_NODE_16698_length_565_cov_1.536585_g15633_i0 PRJNA857143 16698 565 1.536585 8.68170525 Eukaryota 2759 Plants Plants 60.2 3.33e-4   NTclustered gi|2306645722|gb|OK189530.1| 121088 g15633 i0 94.872 1.37522123893805 39 1 7 1 388 425 66846 66808 Ostreobium quekettii voucher Chloroplast genome chloroplast, complete genome blastn 777 60.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
23796246 23796246 PRJNA857143_S_NODE_43339_length_414_cov_2.099707_g42246_i0 PRJNA857143 43339 414 2.099707 8.69278698 Nephroselmis olivacea 31312 Plants Plants 278 6.03e-70   NTclustered gi|110225635|ref|NC_008239.1| 31312 g42246 i0 82.65 5.21256038647343 317 51 76 4 1 315 24283 23969 Nephroselmis olivacea mitochondrion, complete genome blastn 2158 278 1 Eukaryota   Viridiplantae Chlorophyta Nephroselmidophyceae Nephroselmidales Nephroselmidaceae Nephroselmis Nephroselmis olivacea
25069276 25069276 PRJNA857143_S_NODE_137160_length_277_cov_1.284314_g136067_i0 PRJNA857143 137160 277 1.284314 3.55754978 Chlamydomonas reinhardtii 3055 Plants Plants 62.1 4.23e-5   NTclustered gi|2082235449|ref|XM_043058096.1| 3055 g136067 i0 93.023 11.3104693140794 43 2 15 1 14 55 809 767 Chlamydomonas reinhardtii uncharacterized protein (CHLRE_01g001600v5), mRNA blastn 3133 62.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Chlamydomonadaceae Chlamydomonas Chlamydomonas reinhardtii
25070392 25070392 PRJNA857143_S_NODE_65680_length_362_cov_3.304498_g64587_i0 PRJNA857143 65680 362 3.304498 11.96228276 Mantoniella tinhauana 3097027 Plants Plants 130 1.54e-25   NTclustered gi|2735153281|gb|CP140066.1| 3097027 g64587 i0 90 19.4254143646409 100 10 28 0 263 362 1504293 1504194 Mantoniella tinhauana isolate LFS chromosome 5 blastn 7032 130 1 Eukaryota   Viridiplantae Chlorophyta Mamiellophyceae Mamiellales Mamiellaceae Mantoniella Mantoniella tinhauana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;