contig_metadata
4 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Chlamydiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 7221419 | 7221419 | PRJNA857143_S_NODE_145226_length_270_cov_1.979695_g144133_i0 | PRJNA857143 | 145226 | 270 | 1.979695 | 5.3451765 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 327 | 3.67e-85 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g144133 | i0 | 90.947 | 20.9703703703704 | 243 | 22 | 90 | 0 | 23 | 265 | 173361 | 173603 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 5662 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 9771912 | 9771912 | PRJNA857143_S_NODE_21048_length_522_cov_2.485523_g19966_i0 | PRJNA857143 | 21048 | 522 | 2.485523 | 12.97443006 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g19966 | i0 | 91.984 | 150.463601532567 | 499 | 34 | 95 | 6 | 27 | 522 | 2058829 | 2059324 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 78542 | 695 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 17422657 | 17422657 | PRJNA857143_S_NODE_88234_length_327_cov_3.271654_g87141_i0 | PRJNA857143 | 88234 | 327 | 3.271654 | 10.69830858 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 130 | 1.38e-25 | NTclustered | gi|559134048|tpe|HG788966.1| | 264201 | g87141 | i0 | 76.984 | 3.0519877675841 | 252 | 43 | 74 | 14 | 1 | 243 | 389 | 144 | TPA: Candidatus Protochlamydia amoebophila UWE25 transfer-messenger mRNA Proto_amoeb_UWE25, single chain mature transcript | blastn | 998 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 20361686 | 20361686 | PRJNA857143_S_NODE_73416_length_349_cov_1.405797_g72323_i0 | PRJNA857143 | 73416 | 349 | 1.405797 | 4.90623153 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 551 | 2.669999999999999e-152 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g72323 | i0 | 95.143 | 169.676217765043 | 350 | 15 | 100 | 2 | 1 | 349 | 1249939 | 1249591 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 59217 | 556 | 0.991007194244604 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;