contig_metadata
14 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 844451 | 844451 | PRJNA857143_S_NODE_82101_length_336_cov_1.133080_g81008_i0 | PRJNA857143 | 82101 | 336 | 1.13308 | 3.8071488000000002 | Thermoanaerobacterium thermosaccharolyticum | 1517 | Bacteria | Bacteria | 54.7 | 0.009 | NTclustered | gi|302777039|gb|CP002171.1| | 580327 | g81008 | i0 | 100 | 0.0863095238095238 | 29 | 0 | 9 | 0 | 298 | 326 | 1731647 | 1731619 | Thermoanaerobacterium thermosaccharolyticum DSM 571, complete genome | blastn | 29 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Thermoanaerobacterales | Thermoanaerobacteraceae | Thermoanaerobacterium | Thermoanaerobacterium thermosaccharolyticum | ||
| 8495982 | 8495982 | PRJNA857143_S_NODE_126087_length_286_cov_11.591549_g124994_i0 | PRJNA857143 | 126087 | 286 | 11.591549 | 33.15183014 | Pseudoflavonifractor gallinarum | 2779352 | Bacteria | Bacteria | 52.8 | 0.026 | NTclustered | gi|2777655128|dbj|AP031438.1| | 2779352 | g124994 | i0 | 100 | 0.0979020979020979 | 28 | 0 | 10 | 0 | 203 | 230 | 3222077 | 3222104 | Pseudoflavonifractor gallinarum i42-0019-1B4 DNA, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Pseudoflavonifractor | Pseudoflavonifractor gallinarum | ||
| 10163809 | 10163809 | PRJNA857143_S_NODE_127628_length_285_cov_2.028302_g126535_i0 | PRJNA857143 | 127628 | 285 | 2.028302 | 5.7806607 | Bacillus | 1386 | Bacteria | Bacteria | 527 | 3.59e-145 | NTclustered | gi|984728683|gb|CP014179.1| | 1392 | g126535 | i0 | 100 | 1240.95789473684 | 285 | 0 | 100 | 0 | 1 | 285 | 12992 | 12708 | Bacillus anthracis strain Stendal chromosome, complete genome | blastn | 353673 | 527 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus anthracis | ||
| 11046839 | 11046839 | PRJNA857143_S_NODE_1369_length_1324_cov_7.980016_g1114_i0 | PRJNA857143 | 1369 | 1324 | 7.980016 | 105.65541184 | Cohnella cholangitidis | 2598458 | Bacteria | Bacteria | 436 | 3.2e-117 | NTclustered | gi|1886419568|gb|CP041969.1| | 2598458 | g1114 | i0 | 76.613 | 300.39501510574 | 868 | 158 | 64 | 35 | 460 | 1309 | 1481104 | 1481944 | Cohnella cholangitidis strain 1605-214 chromosome, complete genome | blastn | 397723 | 436 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Cohnella | Cohnella cholangitidis | ||
| 11439041 | 11439041 | PRJNA857143_S_NODE_189829_length_244_cov_0.959064_g188736_i0 | PRJNA857143 | 189829 | 244 | 0.959064 | 2.34011616 | Bacteria | 2 | Bacteria | Bacteria | 451 | 1.86e-122 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g188736 | i0 | 100 | 118.176229508197 | 244 | 0 | 100 | 0 | 1 | 244 | 547 | 304 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 28835 | 451 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 12322759 | 12322759 | PRJNA857143_S_NODE_175810_length_250_cov_1.282486_g174717_i0 | PRJNA857143 | 175810 | 250 | 1.282486 | 3.206215 | Pelosinus fermentans | 365349 | Bacteria | Bacteria | 440 | 4.1399999999999976e-119 | NTclustered | gi|763683107|gb|CP010978.1| | 1192197 | g174717 | i0 | 98.4 | 536.208 | 250 | 4 | 100 | 0 | 1 | 250 | 28730 | 28481 | Pelosinus fermentans JBW45, complete genome | blastn | 134052 | 440 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Selenomonadales | Sporomusaceae | Pelosinus | Pelosinus fermentans | ||
| 16537870 | 16537870 | PRJNA857143_S_NODE_120693_length_292_cov_0.990868_g119600_i0 | PRJNA857143 | 120693 | 292 | 0.990868 | 2.89333456 | root | 1 | Root_unresolved | Root_unresolved | 331 | 3.1000000000000002e-86 | NTclustered | gi|2283119276|gb|CP071933.1| | 1390 | g119600 | i0 | 100 | 107.441780821918 | 179 | 0 | 88 | 0 | 98 | 276 | 671 | 493 | Bacillus amyloliquefaciens strain CAS02 plasmid unnamed, complete sequence | blastn | 31373 | 331 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus amyloliquefaciens | ||
| 16537945 | 16537945 | PRJNA857143_S_NODE_6493_length_792_cov_7.293463_g5669_i0 | PRJNA857143 | 6493 | 792 | 7.293463 | 57.76422696 | Clostridium | 1485 | Bacteria | Bacteria | 54.7 | 0.022 | NTclustered | gi|1944081129|gb|CP063959.1| | 1491 | g5669 | i0 | 100 | 0.227272727272727 | 29 | 0 | 4 | 0 | 575 | 603 | 1197664 | 1197692 | Clostridium botulinum strain 3859/11 chromosome, complete genome | blastn | 180 | 54.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 19086809 | 19086809 | PRJNA857143_S_NODE_140055_length_274_cov_2.711443_g138962_i0 | PRJNA857143 | 140055 | 274 | 2.711443 | 7.42935382 | Bacillus | 1386 | Bacteria | Bacteria | 58.4 | 5.41e-4 | NTclustered | gi|2893330844|gb|CP083238.1| | 1402 | g138962 | i0 | 97.059 | 0.886861313868613 | 34 | 1 | 12 | 0 | 169 | 202 | 60443 | 60476 | Bacillus licheniformis strain 2709 chromosome, complete genome | blastn | 243 | 58.4 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus licheniformis | ||
| 19970447 | 19970447 | PRJNA857143_S_NODE_21876_length_516_cov_1.126411_g20790_i0 | PRJNA857143 | 21876 | 516 | 1.126411 | 5.81228076 | Staphylococcus capitis | 29388 | Bacteria | Bacteria | 84.2 | 1.79e-11 | NTclustered | gi|2770665075|gb|CP145244.1| | 74703 | g20790 | i0 | 87.5 | 0.201550387596899 | 72 | 9 | 14 | 0 | 264 | 335 | 1818763 | 1818692 | Staphylococcus capitis subsp. urealyticus strain Sc1365670 chromosome, complete genome | blastn | 104 | 84.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 21245519 | 21245519 | PRJNA857143_S_NODE_161417_length_258_cov_1.351351_g160324_i0 | PRJNA857143 | 161417 | 258 | 1.351351 | 3.48648558 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2318936730|gb|CP107220.1| | 2485925 | g160324 | i0 | 100 | 0.108527131782946 | 28 | 0 | 11 | 0 | 18 | 45 | 1494571 | 1494598 | MAG: Oscillospiraceae bacterium isolate KR001_HAM_0053 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 22519965 | 22519965 | PRJNA857143_S_NODE_144818_length_271_cov_0.893939_g143725_i0 | PRJNA857143 | 144818 | 271 | 0.893939 | 2.42257469 | Staphylococcus hominis | 1290 | Bacteria | Bacteria | 60.2 | 1.49e-4 | NTclustered | gi|2651490693|gb|CP121263.1| | 1290 | g143725 | i0 | 97.143 | 0.690036900369004 | 35 | 1 | 13 | 0 | 231 | 265 | 576265 | 576299 | Staphylococcus hominis strain FSEL1 chromosome, complete genome | blastn | 187 | 60.2 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus hominis | ||
| 22912971 | 22912971 | PRJNA857143_S_NODE_190318_length_244_cov_0.912281_g189225_i0 | PRJNA857143 | 190318 | 244 | 0.912281 | 2.22596564 | Paenibacillus | 44249 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|1868837427|gb|CP058552.1| | 2748863 | g189225 | i0 | 96.875 | 0.262295081967213 | 32 | 0 | 13 | 1 | 148 | 178 | 4157056 | 4157087 | Paenibacillus sp. E222 chromosome | blastn | 64 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus sp. E222 | ||
| 23795891 | 23795891 | PRJNA857143_S_NODE_187439_length_245_cov_1.116279_g186346_i0 | PRJNA857143 | 187439 | 245 | 1.116279 | 2.73488355 | Thermaerobacter marianensis | 73919 | Bacteria | Bacteria | 52.8 | 0.022 | NTclustered | gi|315590829|gb|CP002344.1| | 644966 | g186346 | i0 | 100 | 0.114285714285714 | 28 | 0 | 11 | 0 | 49 | 76 | 307256 | 307283 | Thermaerobacter marianensis DSM 12885, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiales Family XVII. Incertae Sedis | Thermaerobacter | Thermaerobacter marianensis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;