RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 2 ✖

bioproject 1

  • PRJNA857143 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8888263 8888263 PRJNA857143_S_NODE_160547_length_259_cov_0.779570_g159454_i0 PRJNA857143 160547 259 0.77957 2.0190863 root 1 Root_unresolved Root_unresolved 248 2.8e-61   NTclustered gi|2806776288|gb|PQ323358.1| 10497 g159454 i0 85.124 90.5637065637066 242 36 93 0 18 259 113958 113717 Mutant African swine fever virus strain 1033-KE, partial genome blastn 23456 248 1 Viruses   Bamfordvirae Nucleocytoviricota Pokkesviricetes Asfuvirales Asfarviridae Asfivirus Asfivirus haemorrhagiae
22912993 22912993 PRJNA857143_S_NODE_47658_length_402_cov_2.151976_g46565_i0 PRJNA857143 47658 402 2.151976 8.65094352 Megaviricetes 2732523 Viruses Viruses 86.1 3.8e-12   NTclustered gi|939177347|ref|NC_028094.1| 455364 g46565 i0 87.013 0.696517412935323 77 8 19 2 269 343 267701 267625 Chrysochromulina ericina virus isolate CeV-01B, complete genome blastn 280 86.1 1 Viruses   Bamfordvirae Nucleocytoviricota Megaviricetes Algavirales Phycodnaviridae   Chrysochromulina ericina virus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;