contig_metadata
23 rows where analysis = "blastn", bioproject = "PRJNA857143" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5947335 | 5947335 | PRJNA857143_S_NODE_44245_length_411_cov_4.355030_g43152_i0 | PRJNA857143 | 44245 | 411 | 4.35503 | 17.8991733 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 448 | 4.309999999999999e-121 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g43152 | i0 | 87.595 | 86.5961070559611 | 395 | 37 | 95 | 10 | 23 | 411 | 1866195 | 1866583 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 35591 | 448 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 7221419 | 7221419 | PRJNA857143_S_NODE_145226_length_270_cov_1.979695_g144133_i0 | PRJNA857143 | 145226 | 270 | 1.979695 | 5.3451765 | uncultured Chlamydiae bacterium | 305355 | Bacteria | Bacteria | 327 | 3.67e-85 | NTclustered | gi|2874254045|emb|OY970369.1| | 305355 | g144133 | i0 | 90.947 | 20.9703703703704 | 243 | 22 | 90 | 0 | 23 | 265 | 173361 | 173603 | MAG: uncultured Chlamydiae bacterium isolate MFD06092.bin.1.176 genome assembly, chromosome: 1 | blastn | 5662 | 327 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | uncultured Chlamydiae bacterium | ||||
| 8888251 | 8888251 | PRJNA857143_S_NODE_11807_length_639_cov_1.833922_g10790_i0 | PRJNA857143 | 11807 | 639 | 1.833922 | 11.71876158 | Schlesneria | 656899 | Bacteria | Bacteria | 857 | 0 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g10790 | i0 | 92.157 | 503.9593114241 | 612 | 41 | 96 | 5 | 28 | 639 | 1 | 605 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 322030 | 861 | 0.995354239256678 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 9771912 | 9771912 | PRJNA857143_S_NODE_21048_length_522_cov_2.485523_g19966_i0 | PRJNA857143 | 21048 | 522 | 2.485523 | 12.97443006 | uncultured Parachlamydiaceae bacterium | 464461 | Bacteria | Bacteria | 695 | 0 | NTclustered | gi|2874253811|emb|OY969795.1| | 464461 | g19966 | i0 | 91.984 | 150.463601532567 | 499 | 34 | 95 | 6 | 27 | 522 | 2058829 | 2059324 | MAG: uncultured Parachlamydiaceae bacterium isolate MFD05502.bin.c.3 genome assembly, chromosome: 1 | blastn | 78542 | 695 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | uncultured Parachlamydiaceae bacterium | ||
| 9772666 | 9772666 | PRJNA857143_S_NODE_97748_length_316_cov_0.962963_g96655_i0 | PRJNA857143 | 97748 | 316 | 0.962963 | 3.04296308 | Schlesneria sp. DSM 10557 | 3044399 | Bacteria | Bacteria | 507 | 5.25e-139 | NTclustered | gi|2806767875|gb|CP124747.2| | 3044399 | g96655 | i0 | 95.57 | 79.1550632911392 | 316 | 14 | 100 | 0 | 1 | 316 | 4527640 | 4527955 | Schlesneria sp. DSM 10557 chromosome, complete genome | blastn | 25013 | 507 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Schlesneria | Schlesneria sp. DSM 10557 | |
| 11047369 | 11047369 | PRJNA857143_S_NODE_189149_length_244_cov_1.508772_g188056_i0 | PRJNA857143 | 189149 | 244 | 1.508772 | 3.68140368 | Saltatorellus ferox | 2528018 | Bacteria | Bacteria | 202 | 2.07e-47 | NTclustered | gi|1712682957|gb|CP036434.1| | 2528018 | g188056 | i0 | 85.864 | 180.446721311475 | 191 | 25 | 78 | 2 | 31 | 220 | 2930692 | 2930503 | Planctomycetes bacterium Poly30 chromosome, complete genome | blastn | 44029 | 202 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Saltatorellus | Saltatorellus ferox | |||
| 13597042 | 13597042 | PRJNA857143_S_NODE_147191_length_269_cov_1.193878_g146098_i0 | PRJNA857143 | 147191 | 269 | 1.193878 | 3.21153182 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 302 | 2.22e-77 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g146098 | i0 | 87.085 | 5.50557620817844 | 271 | 29 | 99 | 6 | 2 | 269 | 1867798 | 1867531 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 1481 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 14870848 | 14870848 | PRJNA857143_S_NODE_106632_length_306_cov_1.090129_g105539_i0 | PRJNA857143 | 106632 | 306 | 1.090129 | 3.33579474 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 333 | 9.1e-87 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g105539 | i0 | 86.731 | 85.8104575163399 | 309 | 30 | 99 | 10 | 3 | 306 | 1867415 | 1867717 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 26258 | 333 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 16146881 | 16146881 | PRJNA857143_S_NODE_54593_length_385_cov_1.823718_g53500_i0 | PRJNA857143 | 54593 | 385 | 1.823718 | 7.0213143 | Planctomycetaceae bacterium | 2026779 | Bacteria | Bacteria | 231 | 4.399999999999999e-56 | NTclustered | gi|1702190059|gb|CP030884.1| | 2026779 | g53500 | i0 | 78.771 | 215.280519480519 | 358 | 66 | 91 | 9 | 22 | 372 | 437318 | 436964 | Planctomycetaceae bacterium isolate ECT2AJA-110-A chromosome | blastn | 82883 | 231 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomycetaceae bacterium | ||
| 17422657 | 17422657 | PRJNA857143_S_NODE_88234_length_327_cov_3.271654_g87141_i0 | PRJNA857143 | 88234 | 327 | 3.271654 | 10.69830858 | Candidatus Protochlamydia amoebophila | 362787 | Bacteria | Bacteria | 130 | 1.38e-25 | NTclustered | gi|559134048|tpe|HG788966.1| | 264201 | g87141 | i0 | 76.984 | 3.0519877675841 | 252 | 43 | 74 | 14 | 1 | 243 | 389 | 144 | TPA: Candidatus Protochlamydia amoebophila UWE25 transfer-messenger mRNA Proto_amoeb_UWE25, single chain mature transcript | blastn | 998 | 130 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia amoebophila | |
| 17812826 | 17812826 | PRJNA857143_S_NODE_92454_length_322_cov_1.734940_g91361_i0 | PRJNA857143 | 92454 | 322 | 1.73494 | 5.5865068 | Schlesneria | 656899 | Bacteria | Bacteria | 545 | 1.14e-150 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g91361 | i0 | 97.214 | 145.754658385093 | 323 | 8 | 100 | 1 | 1 | 322 | 593 | 915 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 46933 | 545 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 18694594 | 18694594 | PRJNA857143_S_NODE_143035_length_272_cov_1.567839_g141942_i0 | PRJNA857143 | 143035 | 272 | 1.567839 | 4.26452208 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2621786302|emb|OY782760.1| | 2026780 | g141942 | i0 | 100 | 0.110294117647059 | 30 | 0 | 11 | 0 | 83 | 112 | 760504 | 760533 | MAG: Planctomycetota bacterium isolate 4c5731f0-34ce-4739-be05-23ee86c4296e genome assembly, chromosome: 1 | blastn | 30 | 56.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 18694769 | 18694769 | PRJNA857143_S_NODE_15995_length_573_cov_3.306000_g14935_i0 | PRJNA857143 | 15995 | 573 | 3.306 | 18.94338 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 760 | 0 | NTclustered | gi|2874254096|emb|OY970179.1| | 412056 | g14935 | i0 | 90.592 | 115.401396160558 | 574 | 52 | 100 | 2 | 1 | 573 | 1727355 | 1727927 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 | blastn | 66125 | 760 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 19086865 | 19086865 | PRJNA857143_S_NODE_67955_length_358_cov_2.189474_g66862_i0 | PRJNA857143 | 67955 | 358 | 2.189474 | 7.83831692 | Opitutus | 178440 | Bacteria | Bacteria | 590 | 5.8099999999999986e-164 | NTclustered | gi|470483113|ref|NR_076574.1| | 107709 | g66862 | i0 | 96.389 | 98.108938547486 | 360 | 9 | 100 | 4 | 1 | 358 | 1028 | 671 | Opitutus terrae strain PB90-1 23S ribosomal RNA gene, complete sequence | blastn | 35123 | 595 | 0.991596638655462 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus terrae | |
| 20361686 | 20361686 | PRJNA857143_S_NODE_73416_length_349_cov_1.405797_g72323_i0 | PRJNA857143 | 73416 | 349 | 1.405797 | 4.90623153 | Candidatus Protochlamydia | 282132 | Bacteria | Bacteria | 551 | 2.669999999999999e-152 | NTclustered | gi|971146634|emb|LN879502.1| | 389348 | g72323 | i0 | 95.143 | 169.676217765043 | 350 | 15 | 100 | 2 | 1 | 349 | 1249939 | 1249591 | Protochlamydia naegleriophila genome assembly PNK1, chromosome : cPNK | blastn | 59217 | 556 | 0.991007194244604 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 21245081 | 21245081 | PRJNA857143_S_NODE_12237_length_630_cov_3.184919_g11214_i0 | PRJNA857143 | 12237 | 630 | 3.184919 | 20.0649897 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 619 | 1.37e-172 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g11214 | i0 | 84.977 | 136.698412698413 | 639 | 64 | 100 | 18 | 1 | 630 | 1867769 | 1867154 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 86120 | 619 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 21245977 | 21245977 | PRJNA857143_S_NODE_2097_length_1157_cov_4.687269_g249_i1 | PRJNA857143 | 2097 | 1157 | 4.687269 | 54.23170233 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 1482 | 0 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g249 | i1 | 90.297 | 253.509075194468 | 1144 | 93 | 98 | 17 | 25 | 1157 | 1314920 | 1316056 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 293310 | 1482 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 21246090 | 21246090 | PRJNA857143_S_NODE_337_length_1898_cov_3.467945_g249_i0 | PRJNA857143 | 337 | 1898 | 3.467945 | 65.8215961 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 2248 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g249 | i0 | 88.49 | 259.27133825079 | 1894 | 173 | 99 | 43 | 29 | 1898 | 1 | 1873 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 492097 | 2248 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 22520153 | 22520153 | PRJNA857143_S_NODE_16278_length_570_cov_1.615694_g15217_i0 | PRJNA857143 | 16278 | 570 | 1.615694 | 9.2094558 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 793 | 0 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g15217 | i0 | 91.769 | 139.964912280702 | 571 | 46 | 100 | 1 | 1 | 570 | 1867127 | 1866557 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 79780 | 793 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 22520944 | 22520944 | PRJNA857143_S_NODE_59078_length_375_cov_2.649007_g57985_i0 | PRJNA857143 | 59078 | 375 | 2.649007 | 9.93377625 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 497 | 3.81e-136 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g57985 | i0 | 90.885 | 305.109333333333 | 373 | 30 | 99 | 4 | 1 | 373 | 1866897 | 1866529 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 114416 | 497 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 23795084 | 23795084 | PRJNA857143_S_NODE_110299_length_302_cov_1.362445_g109206_i0 | PRJNA857143 | 110299 | 302 | 1.362445 | 4.1145839 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 411 | 4.0299999999999996e-110 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g109206 | i0 | 93.214 | 106.08940397351 | 280 | 18 | 93 | 1 | 23 | 302 | 1314920 | 1315198 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 32039 | 411 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 23795574 | 23795574 | PRJNA857143_S_NODE_157999_length_260_cov_3.016043_g156906_i0 | PRJNA857143 | 157999 | 260 | 3.016043 | 7.8417118 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 392 | 1.2299999999999999e-104 | NTclustered | gi|1927958621|gb|CP054186.1| | 2026777 | g156906 | i0 | 95.181 | 148.434615384615 | 249 | 11 | 95 | 1 | 13 | 260 | 1866810 | 1866562 | MAG: Phycisphaeraceae bacterium isolate H1_PLA1 chromosome | blastn | 38593 | 392 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 25070194 | 25070194 | PRJNA857143_S_NODE_45540_length_408_cov_1.417910_g44447_i0 | PRJNA857143 | 45540 | 408 | 1.41791 | 5.7850728 | Fontisphaera persica | 2974023 | Bacteria | Bacteria | 412 | 1.5599999999999998e-110 | NTclustered | gi|2439237958|gb|CP116615.1| | 2974023 | g44447 | i0 | 85.024 | 60.5882352941176 | 414 | 52 | 100 | 7 | 1 | 408 | 3862473 | 3862882 | Fontisphaera persica strain B-154 chromosome, complete genome | blastn | 24720 | 412 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Limisphaerales | Fontisphaeraceae | Fontisphaera | Fontisphaera persica |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;