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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA855894" and tax_clade = "mixed libraries"

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tax_superkingdom 1

tax_clade 1

  • mixed libraries · 2 ✖

bioproject 1

  • PRJNA855894 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18693637 18693637 PRJNA855894_P_NODE_31495_length_247_cov_1.327586_g31373_i0 PRJNA855894 31495 247 1.327586 3.27913742 Seriatopora hystrix/Symbiodinium mixed library 1076621 Root_unresolved Root_unresolved 235 2.07e-57   NTclustered gi|349573086|gb|JN600040.1| 1076621 g31373 i0 89.947 0.765182186234818 189 10 77 1 59 247 481 302 Seriatopora hystrix/Symbiodinium mixed library clone ShD_C71 mRNA sequence blastn 189 235 1 Eukaryota mixed libraries             Seriatopora hystrix/Symbiodinium mixed library
21244458 21244458 PRJNA855894_P_NODE_34057_length_242_cov_0.911243_g33935_i0 PRJNA855894 34057 242 0.911243 2.20520806 Seriatopora hystrix/Symbiodinium mixed library 1076621 Root_unresolved Root_unresolved 409 1.12e-109   NTclustered gi|349573033|gb|JN599987.1| 1076621 g33935 i0 97.107 4.93801652892562 242 7 100 0 1 242 343 102 Seriatopora hystrix/Symbiodinium mixed library clone ShD_A86 mRNA sequence blastn 1195 409 1 Eukaryota mixed libraries             Seriatopora hystrix/Symbiodinium mixed library

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;