RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA854078" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA854078 · 3 ✖

analysis 1

  • blastn · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3392371 3392371 PRJNA854078_P_NODE_16423_length_242_cov_0.911243_g16211_i0 PRJNA854078 16423 242 0.911243 2.20520806 Malassezia restricta 76775 Fungi Fungi 425 1.11e-114   NTclustered gi|1546630805|ref|XM_027627063.1| 76775 g16211 i0 98.347 1 242 4 100 0 1 242 252 493 Malassezia restricta prohibitin 2 (MRET_0436), partial mRNA blastn 242 425 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
4670168 4670168 PRJNA854078_P_NODE_3564_length_504_cov_1.605568_g3352_i0 PRJNA854078 3564 504 1.605568 8.09206272 Kwoniella shivajii 564305 Fungi Fungi 60.2 2.94e-4   NTclustered gi|2670910157|ref|XM_062933529.1| 564305 g3352 i0 100 0.0634920634920635 32 0 6 0 182 213 823 854 Kwoniella shivajii uncharacterized protein (IL334_001776), partial mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Kwoniella Kwoniella shivajii
8494545 8494545 PRJNA854078_P_NODE_1227_length_861_cov_3.470812_g1052_i0 PRJNA854078 1227 861 3.470812 29.88369132 Suillus clintonianus 1904413 Fungi Fungi 60.2 5.18e-4   NTclustered gi|2033522291|ref|XM_041355278.1| 1904413 g1052 i0 100 0.0371660859465738 32 0 4 0 631 662 479 510 Suillus clintonianus Haloacid dehalogenase-like hydrolase-domain-containing protein (DEU56DRAFT_857252), mRNA blastn 32 60.2 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Boletales Suillaceae Suillus Suillus clintonianus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;