RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA854078" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA854078 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
841752 841752 PRJNA854078_P_NODE_7321_length_348_cov_1.876364_g7109_i0 PRJNA854078 7321 348 1.876364 6.52974672 Flavobacterium sediminis 2201181 Bacteria Bacteria 54.7 0.009   NTclustered gi|1391188358|gb|CP029463.1| 2201181 g7109 i0 100 0.0833333333333333 29 0 8 0 267 295 3205777 3205749 Flavobacterium sediminis strain MEBiC07310 chromosome, complete genome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sediminis
5944829 5944829 PRJNA854078_P_NODE_11845_length_274_cov_1.149254_g11633_i0 PRJNA854078 11845 274 1.149254 3.14895596 Tannerella serpentiformis 712710 Bacteria Bacteria 52.8 0.025   NTclustered gi|1379127804|gb|CP017038.2| 712710 g11633 i0 100 0.204379562043796 28 0 10 0 193 220 1533154 1533181 Tannerella serpentiformis strain W11667 chromosome, complete genome blastn 56 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Tannerellaceae Tannerella Tannerella serpentiformis
8887765 8887765 PRJNA854078_P_NODE_14407_length_250_cov_0.870056_g14195_i0 PRJNA854078 14407 250 0.870056 2.17514 Chryseobacterium 59732 Bacteria Bacteria 407 4.1899999999999994e-109   NTclustered gi|2039848361|gb|CP074372.1| 253 g14195 i0 96 50.924 250 10 100 0 1 250 2274323 2274074 Chryseobacterium indologenes strain PgBE177 chromosome, complete genome blastn 12731 407 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium indologenes
13595417 13595417 PRJNA854078_P_NODE_14351_length_250_cov_0.870056_g14139_i0 PRJNA854078 14351 250 0.870056 2.17514 Chryseobacterium sp. JV274 1932669 Bacteria Bacteria 329 9.34e-86   NTclustered gi|1868782965|emb|LR824569.1| 1932669 g14139 i0 90.4 5.832 250 24 100 0 1 250 1741292 1741541 Chryseobacterium sp. JV274 strain F3_Prior genome assembly, chromosome: I blastn 1458 329 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. JV274
13988609 13988609 PRJNA854078_P_NODE_14111_length_251_cov_0.865169_g13899_i0 PRJNA854078 14111 251 0.865169 2.17157419 Chryseobacterium 59732 Bacteria Bacteria 353 5.569999999999998e-93   NTclustered gi|2039848361|gb|CP074372.1| 253 g13899 i0 92.063 28.0358565737052 252 19 100 1 1 251 189124 189375 Chryseobacterium indologenes strain PgBE177 chromosome, complete genome blastn 7037 353 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium indologenes
16144412 16144412 PRJNA854078_P_NODE_14093_length_251_cov_0.865169_g13881_i0 PRJNA854078 14093 251 0.865169 2.17157419 Chryseobacterium indologenes 253 Bacteria Bacteria 337 5.609999999999998e-88   NTclustered gi|2039848361|gb|CP074372.1| 253 g13881 i0 90.837 2.99601593625498 251 23 100 0 1 251 2966300 2966550 Chryseobacterium indologenes strain PgBE177 chromosome, complete genome blastn 752 337 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium indologenes
22518418 22518418 PRJNA854078_P_NODE_15338_length_246_cov_0.890173_g15126_i0 PRJNA854078 15338 246 0.890173 2.18982558 Chryseobacterium sp. KCF3-3 3231511 Bacteria Bacteria 226 1.2399999999999997e-54   NTclustered gi|2802707432|dbj|AP035792.1| 3231511 g15126 i0 92.949 25.1910569105691 156 9 63 2 91 246 223630 223783 Chryseobacterium sp. KCF3-3 DNA, complete genome blastn 6197 226 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. KCF3-3
23793852 23793852 PRJNA854078_P_NODE_11019_length_284_cov_1.118483_g10807_i0 PRJNA854078 11019 284 1.118483 3.17649172 Sphingobacterium sp. G1-14 2003121 Bacteria Bacteria 525 1.2899999999999994e-144   NTclustered gi|1207396639|gb|CP021381.1| 2003121 g10807 i0 100 11 284 0 100 0 1 284 3541447 3541164 Sphingobacterium sp. G1-14, complete genome blastn 3124 525 1 Bacteria FCB group Pseudomonadati Bacteroidota Sphingobacteriia Sphingobacteriales Sphingobacteriaceae Sphingobacterium Sphingobacterium sp. G1-14

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;