RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "blastn", bioproject = "PRJNA854078" and tax_phylum = "Bacillota"

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tax_superkingdom 1

tax_phylum 1

  • Bacillota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA854078 · 3 ✖

analysis 1

  • blastn · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2117075 2117075 PRJNA854078_P_NODE_15742_length_244_cov_0.900585_g15530_i0 PRJNA854078 15742 244 0.900585 2.1974274 Abyssicoccus albus 1817405 Bacteria Bacteria 407 4.08e-109   NTclustered gi|1142909432|gb|CP019573.1| 1817405 g15530 i0 96.721 1 244 8 100 0 1 244 750843 751086 Abyssicoccus albus strain S31 chromosome, complete genome blastn 244 407 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Abyssicoccaceae Abyssicoccus Abyssicoccus albus
5062818 5062818 PRJNA854078_P_NODE_10524_length_290_cov_1.373272_g10312_i0 PRJNA854078 10524 290 1.373272 3.9824888 Bacillaceae 186817 Bacteria Bacteria 536 6.079999999999999e-148   NTclustered gi|1893059056|gb|CP060137.1| 2760090 g10312 i0 100 935.641379310345 290 0 100 0 1 290 915390 915679 Bacillus sp. PAMC26568 chromosome, complete genome blastn 271336 536 1 Bacteria   Bacillati Bacillota Bacilli Bacillales Bacillaceae Bacillus Bacillus sp. PAMC26568
23793923 23793923 PRJNA854078_P_NODE_3899_length_482_cov_1.264059_g3687_i0 PRJNA854078 3899 482 1.264059 6.09276438 Floricoccus penangensis 1859475 Bacteria Bacteria 56.5 0.004   NTclustered gi|2252512656|gb|CP075561.1| 1859475 g3687 i0 100 0.0622406639004149 30 0 6 0 20 49 1589670 1589699 Floricoccus penangensis strain ML061-4 chromosome, complete genome blastn 30 56.5 1 Bacteria   Bacillati Bacillota Bacilli Lactobacillales Streptococcaceae Floricoccus Floricoccus penangensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;