RNAquarium Metadata Server
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contig_metadata

5 rows where analysis = "blastn", bioproject = "PRJNA854078" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 5 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA854078 · 5 ✖

analysis 1

  • blastn · 5 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2117154 2117154 PRJNA854078_P_NODE_9722_length_301_cov_33.438596_g9510_i0 PRJNA854078 9722 301 33.438596 100.65017396 Komagataella phaffii 460519 Fungi Fungi 329 1.1599999999999998e-85   NTclustered gi|254574191|ref|XM_002494160.1| 644223 g9510 i0 86.379 209.358803986711 301 41 100 0 1 301 452 152 Komagataella phaffii GS115 Ubiquitin (PAS_chr4_0762), partial mRNA blastn 63017 329 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Komagataella Komagataella phaffii
8494571 8494571 PRJNA854078_P_NODE_1527_length_773_cov_15.188571_g1338_i0 PRJNA854078 1527 773 15.188571 117.40765383 Fonsecaea nubica 856822 Fungi Fungi 56.5 0.006   NTclustered gi|1248737062|ref|XM_022639141.1| 856822 g1338 i0 84.127 0.15653298835705 63 4 8 5 540 602 22 78 Fonsecaea nubica rRNA 2'-O-methyltransferase fibrillarin (AYO20_00833), partial mRNA blastn 121 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Herpotrichiellaceae Fonsecaea Fonsecaea nubica
11438529 11438529 PRJNA854078_P_NODE_11789_length_274_cov_2.243781_g11577_i0 PRJNA854078 11789 274 2.243781 6.14795994 Opisthokonta 33154 Fungi Fungi 56.5 0.002   NTclustered gi|2530258994|gb|CP115805.1| 5476 g11577 i0 100 2.42335766423358 30 0 11 0 59 88 1357582 1357553 Candida albicans strain Fungi-01 chromosome 8 blastn 664 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida albicans
12320901 12320901 PRJNA854078_P_NODE_14370_length_250_cov_0.870056_g14158_i0 PRJNA854078 14370 250 0.870056 2.17514 Cyphellophora europaea 293227 Fungi Fungi 150 7.799999999999999e-32   NTclustered gi|671155708|ref|XM_008718239.1| 1220924 g14158 i0 78.205 1.364 234 51 94 0 15 248 942 709 Cyphellophora europaea CBS 101466 uncharacterized protein (HMPREF1541_03891), partial mRNA blastn 341 150 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Chaetothyriales Cyphellophoraceae Cyphellophora Cyphellophora europaea
18692977 18692977 PRJNA854078_P_NODE_14135_length_251_cov_0.865169_g13923_i0 PRJNA854078 14135 251 0.865169 2.17157419 Limtongia smithiae 1125753 Fungi Fungi 54.7 0.006   NTclustered gi|2781505516|ref|XM_066901373.1| 1125753 g13923 i0 96.875 0.127490039840637 32 1 13 0 66 97 634 603 Limtongia smithiae Cupredoxin (V1518DRAFT_371911), partial mRNA blastn 32 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Lipomycetes Lipomycetales Lipomycetaceae Limtongia Limtongia smithiae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;