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contig_metadata

8 rows where analysis = "blastn", bioproject = "PRJNA853203" and tax_phylum = "Verrucomicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Verrucomicrobiota · 8 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853203 · 8 ✖

analysis 1

  • blastn · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
841482 841482 PRJNA853203_P_NODE_37461_length_247_cov_0.896552_g37312_i0 PRJNA853203 37461 247 0.896552 2.21448344 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 340 4.25e-89   NTclustered gi|2874254096|emb|OY970179.1| 412056 g37312 i0 91.498 342.854251012146 247 21 100 0 1 247 557232 556986 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 84685 340 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
841568 841568 PRJNA853203_P_NODE_48821_length_237_cov_2.268293_g48672_i0 PRJNA853203 48821 237 2.268293 5.37585441 Termitidicoccus mucosus 1184151 Bacteria Bacteria 204 5.549999999999999e-48   NTclustered gi|2724066732|gb|CP109796.1| 1184151 g48672 i0 82.609 59.0970464135021 230 40 97 0 8 237 5270154 5269925 Termitidicoccus mucosus strain TSB47 chromosome, complete genome blastn 14006 204 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Termitidicoccus Termitidicoccus mucosus
4669897 4669897 PRJNA853203_P_NODE_29364_length_252_cov_0.871508_g29215_i0 PRJNA853203 29364 252 0.871508 2.19620016 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 250 7.55e-62   NTclustered gi|2022020957|gb|CP059069.1| 2562705 g29215 i0 84.585 2.40079365079365 253 37 100 2 1 252 1745860 1745609 Akkermansiaceae bacterium strain AJA081-3 chromosome, complete genome blastn 605 250 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
7219478 7219478 PRJNA853203_P_NODE_15586_length_276_cov_1.167488_g15437_i0 PRJNA853203 15586 276 1.167488 3.22226688 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 361 3.7099999999999996e-95   NTclustered gi|2874253779|emb|OY969763.1| 412056 g15437 i0 90.288 130.873188405797 278 23 100 4 1 276 3830988 3830713 MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.c.2 genome assembly, chromosome: 1 blastn 36121 361 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
8887693 8887693 PRJNA853203_P_NODE_36947_length_247_cov_1.793103_g36798_i0 PRJNA853203 36947 247 1.793103 4.42896441 Pseudomonadati 3379134 Bacteria Bacteria 359 1.1699999999999999e-94   NTclustered gi|2874254096|emb|OY970179.1| 412056 g36798 i0 93.145 122.016194331984 248 12 100 4 1 247 1727984 1728227 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 30138 359 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
12714316 12714316 PRJNA853203_P_NODE_4890_length_337_cov_1.174242_g4741_i0 PRJNA853203 4890 337 1.174242 3.95719554 Verrucomicrobiota 74201 Bacteria Bacteria 87.9 8.72e-13   NTclustered gi|2874254065|emb|OY970130.1| 412056 g4741 i0 87.013 33.8160237388724 77 10 23 0 261 337 5153936 5154012 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05705.bin.c.1 genome assembly, chromosome: 1 blastn 11396 87.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
14869232 14869232 PRJNA853203_P_NODE_10152_length_289_cov_0.851852_g10003_i0 PRJNA853203 10152 289 0.851852 2.46185228 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 407 4.959999999999999e-109   NTclustered gi|2874254096|emb|OY970179.1| 412056 g10003 i0 92.042 180.705882352941 289 23 100 0 1 289 558018 557730 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 52224 407 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium
16144361 16144361 PRJNA853203_P_NODE_833_length_690_cov_2.904376_g689_i0 PRJNA853203 833 690 2.904376 20.0401944 uncultured Verrucomicrobiae bacterium 412056 Bacteria Bacteria 608 3.2599999999999986e-169   NTclustered gi|2874254096|emb|OY970179.1| 412056 g689 i0 83.117 89.3463768115942 693 86 99 19 1 686 1728542 1729210 MAG: uncultured Verrucomicrobiae bacterium isolate MFD05521.bin.c.1 genome assembly, chromosome: 1 blastn 61649 608 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia       uncultured Verrucomicrobiae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;