RNAquarium Metadata Server
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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA853203" and tax_phylum = "Platyhelminthes"

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tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 7 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853203 · 7 ✖

analysis 1

  • blastn · 7 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
841355 841355 PRJNA853203_P_NODE_18781_length_269_cov_1.102041_g18632_i0 PRJNA853203 18781 269 1.102041 2.96449029 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 176 1.4e-39   NTclustered gi|56753506|gb|AY813225.1| 6182 g18632 i0 98.02 37.546468401487 101 2 38 0 121 221 425 525 Schistosoma japonicum SJCHGC06004 protein mRNA, complete cds blastn 10100 176 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
14869492 14869492 PRJNA853203_P_NODE_43872_length_244_cov_0.912281_g43723_i0 PRJNA853203 43872 244 0.912281 2.22596564 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 69.4 2.19e-7   NTclustered gi|56757963|gb|AY815390.1| 6182 g43723 i0 100 2.42622950819672 37 0 15 0 1 37 451 415 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 592 69.4 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
16144143 16144143 PRJNA853203_P_NODE_23373_length_259_cov_1.419355_g23224_i0 PRJNA853203 23373 259 1.419355 3.67612945 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 353 5.77e-93   NTclustered gi|60699700|gb|AY915813.1| 6182 g23224 i0 99.485 52.2702702702703 194 1 75 0 66 259 17 210 Schistosoma japonicum clone SJCHGC09741 unknown mRNA blastn 13538 353 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
18692641 18692641 PRJNA853203_P_NODE_14595_length_278_cov_1.400000_g14446_i0 PRJNA853203 14595 278 1.4 3.892 Taenia asiatica 60517 Platyhelminthes Platyhelminthes 87.9 7.01e-13   NTclustered gi|124784834|gb|EF201974.1| 60517 g14446 i0 84.884 19.6834532374101 86 13 31 0 3 88 198 283 Taenia asiatica clone HC2-A10 cytoplasmic antigen 1 mRNA, complete cds blastn 5472 87.9 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Cestoda Cyclophyllidea Taeniidae Taenia Taenia asiatica
19968097 19968097 PRJNA853203_P_NODE_4436_length_345_cov_29.900735_g4287_i0 PRJNA853203 4436 345 29.900735 103.15753575 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 573 5.629999999999999e-159   NTclustered gi|56757963|gb|AY815390.1| 6182 g4287 i0 96.562 121.640579710145 349 7 100 3 1 345 1312 1659 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 41966 573 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
21243463 21243463 PRJNA853203_P_NODE_22117_length_261_cov_22.856383_g21968_i0 PRJNA853203 22117 261 22.856383 59.65515963 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 444 3.36e-120   NTclustered gi|56757963|gb|AY815390.1| 6182 g21968 i0 97.328 108.095785440613 262 5 100 2 1 261 1469 1209 Schistosoma japonicum SJCHGC01951 protein mRNA, complete cds blastn 28213 444 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum
22518312 22518312 PRJNA853203_P_NODE_49478_length_231_cov_2.424051_g49329_i0 PRJNA853203 49478 231 2.424051 5.59955781 Schistosoma japonicum 6182 Platyhelminthes Platyhelminthes 318 1.84e-82   NTclustered gi|60698656|gb|AY915745.1| 6182 g49329 i0 98.876 12.7835497835498 178 2 77 0 54 231 467 290 Schistosoma japonicum SJCHGC09658 protein mRNA, partial cds blastn 2953 318 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma japonicum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;