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contig_metadata

7 rows where analysis = "blastn", bioproject = "PRJNA853203" and tax_kingdom = "Orthornavirae"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 7 ✖

bioproject 1

  • PRJNA853203 · 7 ✖

analysis 1

  • blastn · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2116742 2116742 PRJNA853203_P_NODE_1902_length_449_cov_1.300532_g1755_i0 PRJNA853203 1902 449 1.300532 5.83938868 Ripokey virus 3130967 Viruses Viruses 152 4.17e-32   NTclustered gi|2717321269|gb|PP173269.1| 3130967 g1755 i0 80.93 50.7906458797327 215 22 44 9 213 410 503 291 MAG: Ripokey virus isolate KCAP3_k141_298256 genomic sequence blastn 22805 152 1 Viruses   Orthornavirae Kitrinoviricota Magsaviricetes Nodamuvirales     Ripokey virus
4669800 4669800 PRJNA853203_P_NODE_17984_length_270_cov_1.979695_g17835_i0 PRJNA853203 17984 270 1.979695 5.3451765 Betacoronavirus pandemicum 3418604 Viruses Viruses 499 7.349999999999998e-137   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g17835 i0 100 100 270 0 100 0 1 270 599 868 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 27000 499 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
8494408 8494408 PRJNA853203_P_NODE_3887_length_356_cov_1.618375_g3738_i0 PRJNA853203 3887 356 1.618375 5.761415 Betacoronavirus pandemicum 3418604 Viruses Viruses 658 0   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g3738 i0 100 100 356 0 100 0 1 356 2288 2643 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 35600 658 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
13595272 13595272 PRJNA853203_P_NODE_41031_length_245_cov_1.360465_g40882_i0 PRJNA853203 41031 245 1.360465 3.33313925 Betacoronavirus pandemicum 3418604 Viruses Viruses 453 5.1900000000000006e-123   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g40882 i0 100 100 245 0 100 0 1 245 1482 1726 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 24500 453 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
17419567 17419567 PRJNA853203_P_NODE_18194_length_270_cov_1.416244_g18045_i0 PRJNA853203 18194 270 1.416244 3.8238588 Betacoronavirus pandemicum 3418604 Viruses Viruses 488 1.5899999999999995e-133   NTclustered gi|2548435763|emb|OY324778.1| 2697049 g18045 i0 99.259 100 270 2 100 0 1 270 14667 14398 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 27000 488 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
18692694 18692694 PRJNA853203_P_NODE_22555_length_261_cov_1.047872_g22406_i0 PRJNA853203 22555 261 1.047872 2.73494592 Betacoronavirus pandemicum 3418604 Viruses Viruses 477 3.3099999999999986e-130   NTclustered gi|2499447400|emb|OX492971.1| 2697049 g22406 i0 99.617 100 261 1 100 0 1 261 19117 18857 Severe acute respiratory syndrome coronavirus 2 genome assembly, complete genome: monopartite blastn 26100 477 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Nidovirales Coronaviridae Betacoronavirus Betacoronavirus pandemicum
22518045 22518045 PRJNA853203_P_NODE_1238_length_546_cov_3.122622_g1091_i0 PRJNA853203 1238 546 3.122622 17.04951612 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 379 2.17e-100   NTclustered gi|2196303893|gb|MZ678965.1| 3003959 g1091 i0 82.619 30.5201465201465 443 64 79 11 2 434 10279 9840 MAG: Picornavirales sp. isolate s20-k141_1354655 hypothetical protein 1 and hypothetical protein 2 genes, complete cds blastn 16664 379 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;