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contig_metadata

14 rows where analysis = "blastn", bioproject = "PRJNA853203" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 14 ✖

bioproject 1

  • PRJNA853203 · 14 ✖

analysis 1

  • blastn · 14 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2116935 2116935 PRJNA853203_P_NODE_46222_length_243_cov_0.917647_g46073_i0 PRJNA853203 46222 243 0.917647 2.22988221 Phytophthora litchii 100870 SAR_Eukaryotes SAR_Eukaryotes 438 1.4399999999999996e-118   NTclustered gi|2248512916|ref|NC_063792.1| 100870 g46073 i0 99.177 99.7901234567901 243 2 100 0 1 243 1081 839 Phytophthora litchii isolate SHS3 mitochondrion, complete genome blastn 24249 438 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora litchii
5944619 5944619 PRJNA853203_P_NODE_29625_length_251_cov_2.039326_g29476_i0 PRJNA853203 29625 251 2.039326 5.11870826 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 99 2.88e-16   NTclustered gi|325194684|emb|FR825494.1| 890382 g29476 i0 92.754 24.808764940239 69 4 27 1 184 251 206 138 Albugo laibachii Nc14, genomic contig CONTIG_2365_NC14_v4_847_33331 blastn 6227 99 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
5944796 5944796 PRJNA853203_P_NODE_8425_length_293_cov_2.195455_g8276_i0 PRJNA853203 8425 293 2.195455 6.43268315 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 399 8.419999999999998e-107   NTclustered gi|325194231|emb|FR825088.1| 890382 g8276 i0 91.696 1.21843003412969 289 22 98 2 1 287 1208 920 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 357 399 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
8494332 8494332 PRJNA853203_P_NODE_30207_length_251_cov_0.876404_g30058_i0 PRJNA853203 30207 251 0.876404 2.19977404 Neospora caninum 29176 SAR_Eukaryotes SAR_Eukaryotes 252 2.09e-62   NTclustered gi|820695469|tpe|LN714488.1| 572307 g30058 i0 87.907 28.5856573705179 215 25 100 1 25 238 302045 302259 TPA_asm: Neospora caninum Liverpool, unplaced_1, complete genome blastn 7175 252 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
8887740 8887740 PRJNA853203_P_NODE_5487_length_327_cov_1.181102_g5338_i0 PRJNA853203 5487 327 1.181102 3.86220354 Chilodonella 151076 SAR_Eukaryotes SAR_Eukaryotes 518 2.5199999999999998e-142   NTclustered gi|1389430804|gb|MH341632.1| 1654720 g5338 i0 95.399 72.5840978593272 326 13 99 2 3 327 177 501 Chilodonella piscicola strain SC large subunit ribosomal RNA gene, partial sequence blastn 23735 518 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella piscicola
9769659 9769659 PRJNA853203_P_NODE_948_length_633_cov_3.501786_g802_i0 PRJNA853203 948 633 3.501786 22.16630538 Ebria tripartita 361426 SAR_Eukaryotes SAR_Eukaryotes 206 4.5599999999999997e-48   NTclustered gi|290760481|gb|GQ144684.1| 361426 g802 i0 83.051 37.4296998420221 236 31 37 8 1 232 2924 2694 Ebria tripartita large subunit ribosomal RNA gene, partial sequence blastn 23693 206 1 Eukaryota Sar   Cercozoa Thecofilosea   Ebriacea Ebria Ebria tripartita
12320703 12320703 PRJNA853203_P_NODE_35470_length_248_cov_1.177143_g35321_i0 PRJNA853203 35470 248 1.177143 2.91931464 Phytophthora infestans 4787 SAR_Eukaryotes SAR_Eukaryotes 243 1.24e-59   NTclustered gi|301113801|ref|XM_002998625.1| 403677 g35321 i0 84.274 1 248 39 100 0 1 248 3385 3632 Phytophthora infestans T30-4 uncharacterized protein (PITG_06580), partial mRNA blastn 248 243 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora infestans
13595299 13595299 PRJNA853203_P_NODE_44751_length_243_cov_1.611765_g44602_i0 PRJNA853203 44751 243 1.611765 3.91658895 Nitzschia sp. DOCU1 3041873 SAR_Eukaryotes SAR_Eukaryotes 377 3.18e-100   NTclustered gi|2504366779|emb|OX596002.1| 3041873 g44602 i0 94.694 106.17695473251 245 9 100 4 1 243 31785 31543 Nitzschia sp. DOCU1 genome assembly, organelle: mitochondrion blastn 25801 377 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Nitzschia Nitzschia sp. DOCU1
14869450 14869450 PRJNA853203_P_NODE_3812_length_358_cov_1.547368_g3664_i0 PRJNA853203 3812 358 1.547368 5.53957744 Chilodonella hexasticha 1938391 SAR_Eukaryotes SAR_Eukaryotes 586 7.52e-163   NTclustered gi|1389430805|gb|MH341633.1| 1938391 g3664 i0 96.348 74.6480446927374 356 13 99 0 3 358 2316 1961 Chilodonella hexasticha strain C.hexasticha AS large subunit ribosomal RNA gene, partial sequence blastn 26724 586 1 Eukaryota Sar   Ciliophora Phyllopharyngea Chlamydodontida Chilodonellidae Chilodonella Chilodonella hexasticha
15262749 15262749 PRJNA853203_P_NODE_49912_length_228_cov_2.058065_g49763_i0 PRJNA853203 49912 228 2.058065 4.6923882 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 281 2.38e-71   NTclustered gi|2235892989|tpg|BK012092.1| 129355 g49763 i0 88.987 3.99122807017544 227 25 99 0 2 228 23050 23276 TPA_asm: Phytophthora lateralis strain SMST21 mitochondrion, complete genome blastn 910 281 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora lateralis
19086287 19086287 PRJNA853203_P_NODE_8895_length_292_cov_1.100457_g8746_i0 PRJNA853203 8895 292 1.100457 3.21333444 Bodomorpha 188949 SAR_Eukaryotes SAR_Eukaryotes 281 3.17e-71   NTclustered gi|83034975|gb|DQ211604.1| 352465 g8746 i0 98.137 48.3938356164384 161 3 55 0 1 161 383 543 Bodomorpha sp. HFCC57 28S ribosomal RNA gene, partial sequence blastn 14131 281 1 Eukaryota Sar   Cercozoa   Glissomonadida Viridiraptoridae Bodomorpha Bodomorpha sp. HFCC57
19967995 19967995 PRJNA853203_P_NODE_30836_length_251_cov_0.876404_g30687_i0 PRJNA853203 30836 251 0.876404 2.19977404 Phytophthora sojae 67593 SAR_Eukaryotes SAR_Eukaryotes 459 1.1499999999999996e-124   NTclustered gi|695467766|ref|XM_009541409.1| 67593 g30687 i0 99.602 87.4342629482072 251 1 100 0 1 251 251 1 Phytophthora sojae hypothetical protein mRNA blastn 21946 459 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora sojae
22518344 22518344 PRJNA853203_P_NODE_8018_length_297_cov_0.901786_g7869_i0 PRJNA853203 8018 297 0.901786 2.67830442 Albugo laibachii 653948 SAR_Eukaryotes SAR_Eukaryotes 516 8.14e-142   NTclustered gi|325194231|emb|FR825088.1| 890382 g7869 i0 97.98 14.1616161616162 297 6 100 0 1 297 1547 1251 Albugo laibachii Nc14, genomic contig CONTIG_1612_NC14_v4_1853_85 blastn 4206 516 1 Eukaryota Sar   Oomycota Peronosporomycetes Albuginales Albuginaceae Albugo Albugo laibachii
24186155 24186155 PRJNA853203_P_NODE_1559_length_486_cov_4.280872_g1412_i0 PRJNA853203 1559 486 4.280872 20.80503792 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 139 3.5399999999999993e-28   NTclustered gi|1976646300|ref|XR_005506384.1| 5851 g1412 i0 88.793 24.4794238683128 116 9 23 4 150 263 2235 2348 Plasmodium knowlesi strain H 28S ribosomal RNA (PKNH_1001000), rRNA blastn 11897 139 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium knowlesi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;