contig_metadata
9 rows where analysis = "blastn", bioproject = "PRJNA853203" and tax_clade = "Discoba"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1234694 | 1234694 | PRJNA853203_P_NODE_4361_length_347_cov_1.708029_g4212_i0 | PRJNA853203 | 4361 | 347 | 1.708029 | 5.92686063 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 285 | 2.9799999999999996e-72 | NTclustered | gi|1673170038|ref|XR_003828668.1| | 5698 | g4212 | i0 | 91.748 | 73.2305475504323 | 206 | 16 | 59 | 1 | 1 | 205 | 3875 | 4080 | Trypanosoma rangeli 28S ribosomal RNA (TraAM80_08524), rRNA | blastn | 25411 | 285 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma rangeli | ||
| 3392007 | 3392007 | PRJNA853203_P_NODE_12763_length_282_cov_1.492823_g12614_i0 | PRJNA853203 | 12763 | 282 | 1.492823 | 4.20976086 | Crithidia dedva | 1134496 | Euglenozoa | other_Eukaryota | 361 | 3.81e-95 | NTclustered | gi|1002342152|gb|KT944302.1| | 1134496 | g12614 | i0 | 89.691 | 130.549645390071 | 291 | 19 | 100 | 9 | 1 | 282 | 1437 | 1725 | Crithidia dedva strain D2 28S ribosomal RNA gene, partial sequence | blastn | 36815 | 361 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Crithidia | Crithidia dedva | ||
| 3392155 | 3392155 | PRJNA853203_P_NODE_35603_length_248_cov_0.891429_g35454_i0 | PRJNA853203 | 35603 | 248 | 0.891429 | 2.21074392 | Reclinomonas americana | 48483 | Root_unresolved | Root_unresolved | 56.5 | 0.002 | NTclustered | gi|11466495|ref|NC_001823.1| | 48483 | g35454 | i0 | 96.97 | 0.133064516129032 | 33 | 1 | 13 | 0 | 68 | 100 | 5036 | 5068 | Reclinomonas americana mitochondrion, complete genome | blastn | 33 | 56.5 | 1 | Eukaryota | Discoba | Jakobida | Histionidae | Reclinomonas | Reclinomonas americana | ||||
| 8494260 | 8494260 | PRJNA853203_P_NODE_187_length_1533_cov_6.112329_g122_i0 | PRJNA853203 | 187 | 1533 | 6.112329 | 93.70200357 | Allovahlkampfia sp. | 1874883 | Heterolobosea | other_Eukaryota | 331 | 1.81e-85 | NTclustered | gi|2651357784|gb|PP174299.1| | 1874883 | g122 | i0 | 88.686 | 17.0026092628832 | 274 | 27 | 32 | 4 | 419 | 689 | 3195 | 2923 | Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence | blastn | 26065 | 331 | 1 | Eukaryota | Discoba | Heterolobosea | Acrasidae | Allovahlkampfia | Allovahlkampfia sp. | ||||
| 9769395 | 9769395 | PRJNA853203_P_NODE_18488_length_269_cov_1.719388_g18339_i0 | PRJNA853203 | 18488 | 269 | 1.719388 | 4.62515372 | Trypanosoma grayi | 71804 | Euglenozoa | other_Eukaryota | 122 | 1.8499999999999998e-23 | NTclustered | gi|686637812|ref|XM_009313077.1| | 71804 | g18339 | i0 | 76.652 | 0.843866171003718 | 227 | 49 | 84 | 3 | 2 | 226 | 217 | 441 | Trypanosoma grayi putative 60S ribosomal protein L13 partial mRNA | blastn | 227 | 122 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma grayi | ||
| 18692752 | 18692752 | PRJNA853203_P_NODE_29515_length_252_cov_0.871508_g29366_i0 | PRJNA853203 | 29515 | 252 | 0.871508 | 2.19620016 | Leishmania enriettii | 5663 | Euglenozoa | other_Eukaryota | 158 | 4.71e-34 | NTclustered | gi|2794757898|ref|XM_067835193.1| | 5663 | g29366 | i0 | 80 | 2.79365079365079 | 215 | 42 | 85 | 1 | 39 | 252 | 449 | 235 | Leishmania enriettii uncharacterized protein (CUR178_03460), partial mRNA | blastn | 704 | 158 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Leishmania | Leishmania enriettii | ||
| 19968148 | 19968148 | PRJNA853203_P_NODE_576_length_887_cov_5.417690_g449_i0 | PRJNA853203 | 576 | 887 | 5.41769 | 48.0549103 | Parafumarolamoeba stagnalis | 2872509 | Heterolobosea | other_Eukaryota | 1349 | 0 | NTclustered | gi|2086087549|gb|MZ919148.1| | 2872509 | g449 | i0 | 94.369 | 32.3472378804961 | 888 | 34 | 99 | 14 | 1 | 882 | 1197 | 320 | Parafumarolamoeba stagnalis small subunit ribosomal RNA gene, partial sequence | blastn | 28692 | 1349 | 1 | Eukaryota | Discoba | Heterolobosea | Vahlkampfiidae | Parafumarolamoeba | Parafumarolamoeba stagnalis | ||||
| 22912311 | 22912311 | PRJNA853203_P_NODE_26938_length_253_cov_0.866667_g26789_i0 | PRJNA853203 | 26938 | 253 | 0.866667 | 2.19266751 | Allovahlkampfia | 1217108 | Heterolobosea | other_Eukaryota | 468 | 1.92e-127 | NTclustered | gi|399764158|gb|JQ271669.1| | 1217110 | g26789 | i0 | 100 | 30.0355731225296 | 253 | 0 | 100 | 0 | 1 | 253 | 373 | 121 | Allovahlkampfia sp. PKD 2011a strain PS1073J 18S ribosomal RNA gene, partial sequence | blastn | 7599 | 468 | 1 | Eukaryota | Discoba | Heterolobosea | Acrasidae | Allovahlkampfia | Allovahlkampfia sp. PKD 2011a | ||||
| 25461414 | 25461414 | PRJNA853203_P_NODE_6000_length_320_cov_0.947368_g5851_i0 | PRJNA853203 | 6000 | 320 | 0.947368 | 3.0315776 | Trypanosoma | 5690 | Euglenozoa | other_Eukaryota | 217 | 1.01e-51 | NTclustered | gi|1673170038|ref|XR_003828668.1| | 5698 | g5851 | i0 | 90.419 | 52.8 | 167 | 12 | 52 | 4 | 1 | 166 | 3267 | 3430 | Trypanosoma rangeli 28S ribosomal RNA (TraAM80_08524), rRNA | blastn | 16896 | 217 | 1 | Eukaryota | Discoba | Euglenozoa | Kinetoplastea | Trypanosomatida | Trypanosomatidae | Trypanosoma | Trypanosoma rangeli |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;