contig_metadata
10 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3786432 | 3786432 | PRJNA853194_S_NODE_49703_length_308_cov_1.800000_g48612_i0 | PRJNA853194 | 49703 | 308 | 1.8 | 5.544 | Spiroplasma | 2132 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2802839268|emb|OZ181653.1| | 3066280 | g48612 | i0 | 100 | 0.282467532467532 | 28 | 0 | 9 | 0 | 147 | 174 | 956580 | 956607 | Spiroplasma endosymbiont of Rhagonycha fulva isolate 54749 genome assembly, chromosome: 1 | blastn | 87 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Rhagonycha fulva | ||
| 5943800 | 5943800 | PRJNA853194_S_NODE_52185_length_301_cov_2.359649_g51094_i0 | PRJNA853194 | 52185 | 301 | 2.359649 | 7.10254349 | Spiroplasma endosymbiont of Anurida maritima | 2967972 | Bacteria | Bacteria | 56.5 | 0.002 | NTclustered | gi|2812212550|gb|CP102059.1| | 2967972 | g51094 | i0 | 92.5 | 0.132890365448505 | 40 | 2 | 13 | 1 | 67 | 105 | 375099 | 375138 | Spiroplasma endosymbiont of Anurida maritima isolate Wells-next-the-Sea chromosome, complete genome | blastn | 40 | 56.5 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma endosymbiont of Anurida maritima | ||
| 5943897 | 5943897 | PRJNA853194_S_NODE_56445_length_291_cov_1.036697_g55354_i0 | PRJNA853194 | 56445 | 291 | 1.036697 | 3.01678827 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 276 | 1.47e-69 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g55354 | i0 | 83.959 | 1.00687285223368 | 293 | 41 | 99 | 4 | 1 | 290 | 247862 | 247573 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 293 | 276 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 8493975 | 8493975 | PRJNA853194_S_NODE_76407_length_251_cov_1.376404_g75316_i0 | PRJNA853194 | 76407 | 251 | 1.376404 | 3.45477404 | Spiroplasma phoeniceum | 47835 | Bacteria | Bacteria | 58.4 | 4.89e-4 | NTclustered | gi|1434284537|gb|CP031088.1| | 1276259 | g75316 | i0 | 97.143 | 0.139442231075697 | 35 | 0 | 14 | 1 | 94 | 127 | 1709910 | 1709944 | Spiroplasma phoeniceum P40 chromosome, complete genome | blastn | 35 | 58.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma phoeniceum | ||
| 9767914 | 9767914 | PRJNA853194_S_NODE_17508_length_472_cov_3.746867_g16419_i0 | PRJNA853194 | 17508 | 472 | 3.746867 | 17.68521224 | Candidatus Phytoplasma fraxini | 35780 | Bacteria | Bacteria | 52.8 | 0.046 | NTclustered | gi|2714275034|gb|CP146843.1| | 35780 | g16419 | i0 | 100 | 0.0593220338983051 | 28 | 0 | 6 | 0 | 412 | 439 | 530093 | 530066 | Candidatus Phytoplasma fraxini isolate AshY1 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Candidatus Phytoplasma | Candidatus Phytoplasma fraxini | ||
| 12320483 | 12320483 | PRJNA853194_S_NODE_87050_length_232_cov_2.421384_g85959_i0 | PRJNA853194 | 87050 | 232 | 2.421384 | 5.61761088 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 412 | 8.26e-111 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g85959 | i0 | 98.707 | 1.99568965517241 | 232 | 3 | 100 | 0 | 1 | 232 | 540265 | 540496 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 463 | 412 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 16143250 | 16143250 | PRJNA853194_S_NODE_45613_length_320_cov_1.858300_g44522_i0 | PRJNA853194 | 45613 | 320 | 1.8583 | 5.94656 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 449 | 9.11e-122 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g44522 | i0 | 91.95 | 1.009375 | 323 | 22 | 100 | 4 | 1 | 320 | 581456 | 581777 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 323 | 449 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 16143505 | 16143505 | PRJNA853194_S_NODE_58473_length_286_cov_1.446009_g57382_i0 | PRJNA853194 | 58473 | 286 | 1.446009 | 4.13558574 | Mycoplasma wenyonii | 65123 | Bacteria | Bacteria | 303 | 6.61e-78 | NTclustered | gi|395455868|gb|CP003703.1| | 1197325 | g57382 | i0 | 86.316 | 0.996503496503496 | 285 | 32 | 97 | 5 | 1 | 278 | 163601 | 163317 | Mycoplasma wenyonii str. Massachusetts, complete genome | blastn | 285 | 303 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma wenyonii | ||
| 17418721 | 17418721 | PRJNA853194_S_NODE_47414_length_315_cov_1.297521_g46323_i0 | PRJNA853194 | 47414 | 315 | 1.297521 | 4.08719115 | Spiroplasma ixodetis | 2141 | Bacteria | Bacteria | 52.8 | 0.029 | NTclustered | gi|2522717419|gb|CP127039.1| | 1276219 | g46323 | i0 | 100 | 0.0888888888888889 | 28 | 0 | 9 | 0 | 96 | 123 | 1156347 | 1156320 | Spiroplasma ixodetis Y32 chromosome, complete genome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma ixodetis | ||
| 22517017 | 22517017 | PRJNA853194_S_NODE_36918_length_350_cov_2.368231_g35827_i0 | PRJNA853194 | 36918 | 350 | 2.368231 | 8.2888085 | Mycoplasmopsis bovis | 28903 | Bacteria | Bacteria | 52.8 | 0.033 | NTclustered | gi|1951464263|gb|CP058416.1| | 28903 | g35827 | i0 | 100 | 0.08 | 28 | 0 | 8 | 0 | 163 | 190 | 204913 | 204940 | Mycoplasmopsis bovis strain Mb200 chromosome | blastn | 28 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovis |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;