RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853194 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21241908 21241908 PRJNA853194_S_NODE_16957_length_478_cov_38.054321_g15868_i0 PRJNA853194 16957 478 38.054321 181.89965438 Lichtheimia ornata 688661 Fungi Fungi 67.6 1.66e-6   NTclustered gi|2553570039|ref|XM_058484812.1| 688661 g15868 i0 95.238 2.94769874476987 42 2 9 0 164 205 277 318 Lichtheimia ornata uncharacterized protein (O0I10_004760), partial mRNA blastn 1409 67.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
25066701 25066701 PRJNA853194_S_NODE_4980_length_804_cov_218.813953_g4153_i0 PRJNA853194 4980 804 218.813953 1759.26418212 Cokeromyces recurvatus 90255 Fungi Fungi 139 6.03e-28   NTclustered gi|2324083924|ref|XM_051529241.1| 90255 g4153 i0 77.447 5.68283582089552 235 52 29 1 88 322 39 272 Cokeromyces recurvatus cell division control protein 42 (BX663DRAFT_521419), mRNA blastn 4569 139 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;