RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_phylum = "Echinodermata"

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tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853194 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
840512 840512 PRJNA853194_S_NODE_47801_length_314_cov_0.854772_g46710_i0 PRJNA853194 47801 314 0.854772 2.68398408 Anneissia japonica 1529436 Echinodermata other_Eukaryota 56.5 0.002   NTclustered gi|1826649206|ref|XM_033256563.1| 1529436 g46710 i0 96.97 0.210191082802548 33 1 11 0 125 157 2505 2473 PREDICTED: Anneissia japonica uncharacterized LOC117113265 (LOC117113265), mRNA blastn 66 56.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
5944365 5944365 PRJNA853194_S_NODE_83745_length_243_cov_0.905882_g82654_i0 PRJNA853194 83745 243 0.905882 2.20129326 Lytechinus variegatus 7654 Echinodermata other_Eukaryota 52.8 0.022   NTclustered gi|2037920109|ref|XR_005970915.1| 7654 g82654 i0 100 0.345679012345679 28 0 12 0 145 172 1785 1758 PREDICTED: Lytechinus variegatus uncharacterized LOC121420974 (LOC121420974), transcript variant X2, ncRNA blastn 84 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus variegatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;