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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_phylum = "Bacteroidota"

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tax_superkingdom 1

tax_phylum 1

  • Bacteroidota · 22 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853194 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
839835 839835 PRJNA853194_S_NODE_16701_length_482_cov_1.748166_g15612_i0 PRJNA853194 16701 482 1.748166 8.42616012 Chryseobacterium sp. E1 2853434 Bacteria Bacteria 52.8 0.047   NTclustered gi|2065946897|gb|CP078104.1| 2853434 g15612 i0 100 0.0580912863070539 28 0 6 0 156 183 502633 502660 Chryseobacterium sp. E1 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium sp. E1
840875 840875 PRJNA853194_S_NODE_66841_length_268_cov_4.615385_g65750_i0 PRJNA853194 66841 268 4.615385 12.3692318 Candidatus Shikimatogenerans bostrichidophilus 2943807 Bacteria Bacteria 52.8 0.025   NTclustered gi|2618221508|gb|CP104096.1| 2943807 g65750 i0 96.875 0.119402985074627 32 0 12 1 87 117 32111 32142 Candidatus Shikimatogenerans bostrichidophilus isolate Strain C chromosome, complete genome blastn 32 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales   Candidatus Shikimatogenerans Candidatus Shikimatogenerans bostrichidophilus
3391898 3391898 PRJNA853194_S_NODE_84263_length_242_cov_1.508876_g83172_i0 PRJNA853194 84263 242 1.508876 3.65147992 Lutibacter sp. A64 2918526 Bacteria Bacteria 54.7 0.006   NTclustered gi|2201049089|gb|CP092487.1| 2918526 g83172 i0 100 0.119834710743802 29 0 12 0 14 42 1098306 1098278 Lutibacter sp. A64 chromosome, complete genome blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Lutibacter Lutibacter sp. A64
4668781 4668781 PRJNA853194_S_NODE_39384_length_341_cov_1.585821_g38293_i0 PRJNA853194 39384 341 1.585821 5.40764961 Seonamhaeicola sp. ML3 2937786 Bacteria Bacteria 56.5 0.002   NTclustered gi|2235330891|gb|CP096884.1| 2937786 g38293 i0 100 0.0879765395894428 30 0 9 0 185 214 61485 61514 Seonamhaeicola sp. ML3 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Seonamhaeicola Seonamhaeicola sp. ML3
4669152 4669152 PRJNA853194_S_NODE_58604_length_286_cov_1.061033_g57513_i0 PRJNA853194 58604 286 1.061033 3.03455438 Polaribacter dokdonensis 326329 Bacteria Bacteria 52.8 0.026   NTclustered gi|2274417251|gb|CP101505.1| 326329 g57513 i0 100 0.0979020979020979 28 0 10 0 185 212 326452 326479 Polaribacter dokdonensis strain KCTC 12392 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Polaribacter Polaribacter dokdonensis
5943072 5943072 PRJNA853194_S_NODE_18245_length_464_cov_2.335038_g17155_i0 PRJNA853194 18245 464 2.335038 10.83457632 Bacteroides nordii 291645 Bacteria Bacteria 52.8 0.045   NTclustered gi|2093932526|gb|CP082886.1| 291645 g17155 i0 100 0.0603448275862069 28 0 6 0 164 191 2119774 2119747 Bacteroides nordii strain FDAARGOS_1461 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Bacteroidaceae Bacteroides Bacteroides nordii
5944081 5944081 PRJNA853194_S_NODE_67185_length_268_cov_1.184615_g66094_i0 PRJNA853194 67185 268 1.184615 3.1747682 Salegentibacter sp. T436 1729720 Bacteria Bacteria 444 3.46e-120   NTclustered gi|1127561907|gb|CP012872.1| 1729720 g66094 i0 96.642 3.63432835820896 268 8 100 1 1 268 3346123 3346389 Salegentibacter sp. T436 chromosome, complete genome blastn 974 444 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Salegentibacter Salegentibacter sp. T436
7218718 7218718 PRJNA853194_S_NODE_51806_length_302_cov_2.449782_g50715_i0 PRJNA853194 51806 302 2.449782 7.39834164 Flavobacterium sp. CS20 2775246 Bacteria Bacteria 52.8 0.028   NTclustered gi|2027300824|gb|CP073015.1| 2775246 g50715 i0 96.875 0.105960264900662 32 0 10 1 193 223 770431 770400 Flavobacterium sp. CS20 chromosome, complete genome blastn 32 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. CS20
8887516 8887516 PRJNA853194_S_NODE_39967_length_339_cov_1.218045_g38876_i0 PRJNA853194 39967 339 1.218045 4.12917255 Flavobacterium 237 Bacteria Bacteria 54.7 0.009   NTclustered gi|1735479352|gb|CP031763.1| 986 g38876 i0 100 0.595870206489675 29 0 9 0 64 92 5131337 5131365 Flavobacterium johnsoniae strain FJ001 chromosome blastn 202 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium johnsoniae
9767939 9767939 PRJNA853194_S_NODE_18968_length_457_cov_3.960938_g17878_i0 PRJNA853194 18968 457 3.960938 18.10148666 Prevotella jejuni 1177574 Bacteria Bacteria 52.8 0.044   NTclustered gi|2028869951|gb|CP072363.1| 1177574 g17878 i0 100 0.12253829321663 28 0 6 0 25 52 882638 882665 Prevotella jejuni strain F0697 chromosome 1, complete sequence blastn 56 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales Prevotellaceae Prevotella Prevotella jejuni
9768820 9768820 PRJNA853194_S_NODE_60948_length_281_cov_1.000000_g59857_i0 PRJNA853194 60948 281 1 2.81 uncultured Bacteroidales bacterium 194843 Bacteria Bacteria 52.8 0.026   NTclustered gi|2874253951|emb|OY970276.1| 194843 g59857 i0 100 0.099644128113879 28 0 10 0 7 34 4538478 4538451 MAG: uncultured Bacteroidales bacterium isolate MFD06435.bin.1.129 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Bacteroidia Bacteroidales     uncultured Bacteroidales bacterium
9768965 9768965 PRJNA853194_S_NODE_69048_length_264_cov_1.958115_g67957_i0 PRJNA853194 69048 264 1.958115 5.1694236 Candidatus Shikimatogenerans sp. AspAUS03 3158563 Bacteria Bacteria 56.5 0.002   NTclustered gi|2859865218|gb|CP157897.2| 3158563 g67957 i0 94.595 0.140151515151515 37 1 14 1 229 264 58922 58886 MAG: Candidatus Shikimatogenerans sp. AspAUS03 chromosome blastn 37 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales   Candidatus Shikimatogenerans Candidatus Shikimatogenerans sp. AspAUS03
11044070 11044070 PRJNA853194_S_NODE_4229_length_858_cov_59.298089_g3458_i0 PRJNA853194 4229 858 59.298089 508.77760362 Candidatus Karelsulcia muelleri 336810 Bacteria Bacteria 62.1 1.44e-4   NTclustered gi|2717309477|emb|OZ032149.1| 336810 g3458 i0 97.222 0.041958041958042 36 1 4 0 677 712 226088 226053 Candidatus Karelsulcia muelleri isolate 1d4c07cd-1054-4c54-98f9-64159b4f6ee4 genome assembly, chromosome: 1 blastn 36 62.1 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales   Candidatus Karelsulcia Candidatus Karelsulcia muelleri
12319850 12319850 PRJNA853194_S_NODE_52310_length_301_cov_1.539474_g51219_i0 PRJNA853194 52310 301 1.539474 4.63381674 Flavobacteriaceae bacterium 1871037 Bacteria Bacteria 52.8 0.028   NTclustered gi|1885860246|gb|CP046177.1| 1871037 g51219 i0 100 0.186046511627907 28 0 9 0 43 70 3230728 3230755 Flavobacteriaceae bacterium isolate MH-Pat-all_autometa_1-8 chromosome blastn 56 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae   Flavobacteriaceae bacterium
12319898 12319898 PRJNA853194_S_NODE_55070_length_294_cov_1.325792_g53979_i0 PRJNA853194 55070 294 1.325792 3.89782848 Flavobacterium dauae 1563479 Bacteria Bacteria 56.5 0.002   NTclustered gi|2557430891|gb|CP130821.1| 1563479 g53979 i0 100 0.102040816326531 30 0 10 0 40 69 1161438 1161409 Flavobacterium dauae strain TCH3-2 chromosome, complete genome blastn 30 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium dauae
13594459 13594459 PRJNA853194_S_NODE_58371_length_286_cov_1.896714_g57280_i0 PRJNA853194 58371 286 1.896714 5.42460204 Pontimicrobium sp. IMCC45349 3391574 Bacteria Bacteria 52.8 0.026   NTclustered gi|2894497685|gb|CP178208.1| 3391574 g57280 i0 100 0.0979020979020979 28 0 10 0 255 282 902600 902573 Pontimicrobium sp. IMCC45349 chromosome, complete genome blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Pontimicrobium Pontimicrobium sp. IMCC45349
14868726 14868726 PRJNA853194_S_NODE_60812_length_281_cov_1.389423_g59721_i0 PRJNA853194 60812 281 1.389423 3.90427863 uncultured Chitinophagaceae bacterium 866510 Bacteria Bacteria 52.8 0.026   NTclustered gi|2874253850|emb|OY969906.1| 866510 g59721 i0 100 0.099644128113879 28 0 10 0 77 104 3609171 3609144 MAG: uncultured Chitinophagaceae bacterium isolate MFD05502.bin.c.1 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae   uncultured Chitinophagaceae bacterium
18691511 18691511 PRJNA853194_S_NODE_3235_length_962_cov_3.363330_g2564_i0 PRJNA853194 3235 962 3.36333 32.3552346 Chryseobacterium gambrini 373672 Bacteria Bacteria 54.7 0.027   NTclustered gi|2429070341|gb|CP115857.1| 373672 g2564 i0 96.875 0.0665280665280665 32 1 3 0 751 782 2931749 2931780 Chryseobacterium gambrini strain PL22-1A chromosome, complete genome blastn 64 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Weeksellaceae Chryseobacterium Chryseobacterium gambrini
18691529 18691529 PRJNA853194_S_NODE_33275_length_365_cov_5.287671_g32184_i0 PRJNA853194 33275 365 5.287671 19.29999915 Flavobacterium eburneipallidum 3003263 Bacteria Bacteria 54.7 0.01   NTclustered gi|2493280413|gb|CP114291.2| 3003263 g32184 i0 100 0.30958904109589 29 0 8 0 336 364 1836619 1836591 Flavobacterium eburneipallidum strain IMCC36793 chromosome, complete genome blastn 113 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium eburneipallidum
21242430 21242430 PRJNA853194_S_NODE_41937_length_332_cov_1.691120_g40846_i0 PRJNA853194 41937 332 1.69112 5.6145184 Flavobacterium sp. CECT 9288 2845819 Bacteria Bacteria 54.7 0.009   NTclustered gi|2152726014|emb|OU957226.1| 2845819 g40846 i0 100 0.0873493975903614 29 0 9 0 43 71 2178900 2178928 Flavobacterium sp. CECT 9288 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Flavobacterium Flavobacterium sp. CECT 9288
22516958 22516958 PRJNA853194_S_NODE_34398_length_360_cov_21.087108_g33307_i0 PRJNA853194 34398 360 21.087108 75.9135888 Thermoflavifilum sp. 1968839 Bacteria Bacteria 56.5 0.003   NTclustered gi|1919310413|gb|CP063141.1| 1968839 g33307 i0 97.059 0.638888888888889 34 0 9 1 156 188 302605 302638 Thermoflavifilum sp. isolate Bu77 chromosome blastn 230 56.5 1 Bacteria FCB group Pseudomonadati Bacteroidota Chitinophagia Chitinophagales Chitinophagaceae Thermoflavifilum Thermoflavifilum sp.
22517402 22517402 PRJNA853194_S_NODE_56638_length_290_cov_2.092166_g55547_i0 PRJNA853194 56638 290 2.092166 6.0672814 Christiangramia fulva 2126553 Bacteria Bacteria 52.8 0.027   NTclustered gi|1371467338|gb|CP028136.1| 2126553 g55547 i0 94.286 0.120689655172414 35 1 12 1 67 101 3097217 3097184 Christiangramia fulva strain SH35 chromosome, complete genome blastn 35 52.8 1 Bacteria FCB group Pseudomonadati Bacteroidota Flavobacteriia Flavobacteriales Flavobacteriaceae Christiangramia Christiangramia fulva

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;