RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

17 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_phylum = "Ascomycota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 17 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA853194 · 17 ✖

analysis 1

  • blastn · 17 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3390792 3390792 PRJNA853194_S_NODE_25823_length_405_cov_0.930723_g24732_i0 PRJNA853194 25823 405 0.930723 3.76942815 Saccharomycopsis malanga 44092 Fungi Fungi 56.5 0.003   NTclustered gi|1554514677|gb|CP025327.1| 44092 g24732 i0 92.308 0.0962962962962963 39 3 10 0 204 242 106621 106583 Saccharomycopsis malanga strain KCN26 mitochondrion blastn 39 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Ascoideales Saccharomycopsidaceae Saccharomycopsis Saccharomycopsis malanga
4669063 4669063 PRJNA853194_S_NODE_53504_length_298_cov_1.320000_g52413_i0 PRJNA853194 53504 298 1.32 3.9336 Trematosphaeria pertusa 390896 Fungi Fungi 56.5 0.002   NTclustered gi|1835107105|ref|XM_033829793.1| 390896 g52413 i0 100 8.25167785234899 30 0 10 0 15 44 189 218 Trematosphaeria pertusa uncharacterized protein (BU26DRAFT_522475), mRNA blastn 2459 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Pleosporales Trematosphaeriaceae Trematosphaeria Trematosphaeria pertusa
5062545 5062545 PRJNA853194_S_NODE_33424_length_365_cov_1.537671_g32333_i0 PRJNA853194 33424 365 1.537671 5.61249915 Ophiostomataceae 5152 Fungi Fungi 54.7 0.01   NTclustered gi|257097865|gb|FJ717838.1| 5174 g32333 i0 100 0.742465753424657 29 0 8 0 36 64 855 827 Ophiostoma ulmi strain WIN(M)1223 large subunit ribosomal RNA (rnl) gene, partial sequence; and ribosomal protein 3/homing endonuclease-like fusion protein (rps3/HEG fusion) gene, complete cds; mitochondrial blastn 271 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Ophiostomatales Ophiostomataceae Ophiostoma Ophiostoma ulmi
5943792 5943792 PRJNA853194_S_NODE_51825_length_302_cov_2.248908_g50734_i0 PRJNA853194 51825 302 2.248908 6.79170216 Pichia kudriavzevii 4909 Fungi Fungi 52.8 0.028   NTclustered gi|2210890464|gb|CP093510.1| 4909 g50734 i0 100 0.0927152317880795 28 0 9 0 189 216 331905 331932 Pichia kudriavzevii strain GS1-1 chromosome 5 blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Pichiales Pichiaceae Pichia Pichia kudriavzevii
9768286 9768286 PRJNA853194_S_NODE_34288_length_361_cov_2.100694_g33197_i0 PRJNA853194 34288 361 2.100694 7.58350534 Wickerhamomyces canadensis 1156965 Fungi Fungi 54.7 0.01   NTclustered gi|11466048|ref|NC_001762.1| 1156965 g33197 i0 94.286 0.0969529085872576 35 2 10 0 268 302 6454 6488 Pichia canadensis mitochondrion, complete genome blastn 35 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces canadensis
9768339 9768339 PRJNA853194_S_NODE_37428_length_348_cov_2.527273_g36337_i0 PRJNA853194 37428 348 2.527273 8.79491004 Trichoderma atroviride 63577 Fungi Fungi 86.1 3.25e-12   NTclustered gi|2749703766|ref|XM_014090103.2| 63577 g36337 i0 88 1.26724137931034 75 6 22 1 137 211 2269 2198 Trichoderma atroviride uncharacterized protein (TrAtP1_012533), partial mRNA blastn 441 86.1 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Hypocreaceae Trichoderma Trichoderma atroviride
12320242 12320242 PRJNA853194_S_NODE_72850_length_257_cov_1.831522_g71759_i0 PRJNA853194 72850 257 1.831522 4.70701154 Colletotrichum scovillei 1209932 Fungi Fungi 54.7 0.006   NTclustered gi|1868487896|ref|XM_035471490.1| 1209932 g71759 i0 100 0.54863813229572 29 0 11 0 96 124 3515 3543 Colletotrichum scovillei RNA recognition domain-containing protein (HER10_EVM0001755), mRNA blastn 141 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Glomerellales Glomerellaceae Colletotrichum Colletotrichum scovillei
12320519 12320519 PRJNA853194_S_NODE_9510_length_609_cov_1.759328_g8478_i0 PRJNA853194 9510 609 1.759328 10.71430752 [Candida] subhashii 561895 Fungi Fungi 54.7 0.017   NTclustered gi|2272013728|ref|XM_049406769.1| 561895 g8478 i0 100 0.0476190476190476 29 0 5 0 178 206 858 886 [Candida] subhashii BUD2 (J8A68_002965), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Spathaspora [Candida] subhashii
17812000 17812000 PRJNA853194_S_NODE_52274_length_301_cov_1.692982_g51183_i0 PRJNA853194 52274 301 1.692982 5.09587582 Cordycipitaceae 474943 Fungi Fungi 551 2.2699999999999992e-152   NTclustered gi|1473262842|gb|MH875786.1| 37999 g51183 i0 99.668 100 301 1 100 0 1 301 604 304 Beauveria tenella culture CBS:126934 strain CBS 126934 large subunit ribosomal RNA gene, partial sequence blastn 30100 556 0.991007194244604 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Hypocreales Cordycipitaceae Beauveria Beauveria tenella
18691695 18691695 PRJNA853194_S_NODE_41755_length_333_cov_1.023077_g40664_i0 PRJNA853194 41755 333 1.023077 3.40684641 Aspergillus chevalieri 182096 Fungi Fungi 52.8 0.031   NTclustered gi|2086738146|ref|XM_043280429.1| 182096 g40664 i0 100 0.0840840840840841 28 0 8 0 56 83 609 636 Aspergillus chevalieri uncharacterized protein (ACHE_50685A), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Aspergillus Aspergillus chevalieri
18692168 18692168 PRJNA853194_S_NODE_65215_length_272_cov_1.155779_g64124_i0 PRJNA853194 65215 272 1.155779 3.14371888 Endocarpon pusillum 364733 Fungi Fungi 52.8 0.025   NTclustered gi|629643547|ref|XM_007802487.1| 1263415 g64124 i0 100 0.102941176470588 28 0 10 0 1 28 369 342 Endocarpon pusillum Z07020 uncharacterized protein (EPUS_00928), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Verrucariales Verrucariaceae Endocarpon Endocarpon pusillum
18692438 18692438 PRJNA853194_S_NODE_80035_length_247_cov_1.109195_g78944_i0 PRJNA853194 80035 247 1.109195 2.73971165 Annulohypoxylon maeteangense 1927788 Fungi Fungi 56.5 0.002   NTclustered gi|2234903655|ref|XM_047959521.1| 1927788 g78944 i0 96.97 0.279352226720648 33 1 13 0 43 75 172 140 Annulohypoxylon maeteangense Oxysterol-binding protein (GGS22DRAFT_151629), mRNA blastn 69 56.5 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Xylariales Hypoxylaceae Annulohypoxylon Annulohypoxylon maeteangense
19966454 19966454 PRJNA853194_S_NODE_21016_length_439_cov_1.166667_g19925_i0 PRJNA853194 21016 439 1.166667 5.12166813 Zymoseptoria tritici 1047171 Fungi Fungi 52.8 0.042   NTclustered gi|2021827471|gb|CP062575.1| 1047171 g19925 i0 100 0.0637813211845103 28 0 6 0 46 73 550970 550943 Zymoseptoria tritici isolate M4_8 chromosome 18 blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Mycosphaerellales Mycosphaerellaceae Zymoseptoria Zymoseptoria tritici
21241867 21241867 PRJNA853194_S_NODE_15057_length_502_cov_2.913753_g13972_i0 PRJNA853194 15057 502 2.913753 14.62704006 Candida pseudojiufengensis 497109 Fungi Fungi 52.8 0.049   NTclustered gi|2325086576|ref|XM_051758856.1| 497109 g13972 i0 100 0.0557768924302789 28 0 6 0 193 220 988 1015 Candida pseudojiufengensis MCM2 (KGF55_003999), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida pseudojiufengensis
23793289 23793289 PRJNA853194_S_NODE_7659_length_669_cov_19.739933_g6682_i0 PRJNA853194 7659 669 19.739933 132.06015177 Candida margitis 1775924 Fungi Fungi 54.7 0.019   NTclustered gi|2325475487|ref|XM_051817735.1| 1775924 g6682 i0 100 0.0433482810164425 29 0 4 0 127 155 1845 1873 Candida margitis uncharacterized protein (CANMA_005361), partial mRNA blastn 29 54.7 1 Eukaryota Opisthokonta Fungi Ascomycota Pichiomycetes Serinales Debaryomycetaceae Candida Candida margitis
25066876 25066876 PRJNA853194_S_NODE_58600_length_286_cov_1.079812_g57509_i0 PRJNA853194 58600 286 1.079812 3.08826232 Wickerhamomyces ciferrii 1041607 Fungi Fungi 52.8 0.026   NTclustered gi|754405368|ref|XM_011274464.1| 1041607 g57509 i0 100 0.0979020979020979 28 0 10 0 77 104 99 126 Wickerhamomyces ciferrii 27S pre-rRNA (guanosine2922-2'-O)-methyltransferase (BN7_4996), partial mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Fungi Ascomycota Saccharomycetes Phaffomycetales Wickerhamomycetaceae Wickerhamomyces Wickerhamomyces ciferrii
25461244 25461244 PRJNA853194_S_NODE_87020_length_232_cov_2.893082_g85929_i0 PRJNA853194 87020 232 2.893082 6.71195024 root 1 Root_unresolved Root_unresolved 429 8.2e-116   NTclustered gi|1280049812|gb|MF072571.1| 29917 g85929 i0 100 100 232 0 100 0 1 232 703 934 Cladosporium cladosporioides strain 007 small subunit ribosomal RNA gene, partial sequence blastn 23200 429 1 Eukaryota Opisthokonta Fungi Ascomycota Dothideomycetes Cladosporiales Cladosporiaceae Cladosporium Cladosporium cladosporioides

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;