RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA853194" and tax_clade = "Methanomada group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA853194 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11044767 11044767 PRJNA853194_S_NODE_80349_length_247_cov_0.885057_g79258_i0 PRJNA853194 80349 247 0.885057 2.18609079 Methanobrevibacter olleyae 294671 Archaea Archaea 54.7 0.006   NTclustered gi|998157363|gb|CP014265.1| 294671 g79258 i0 96.875 0.129554655870445 32 1 13 0 147 178 1773494 1773463 Methanobrevibacter olleyae strain YLM1 chromosome, complete genome blastn 32 54.7 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanobrevibacter Methanobrevibacter olleyae
18691469 18691469 PRJNA853194_S_NODE_30835_length_377_cov_2.029605_g29744_i0 PRJNA853194 30835 377 2.029605 7.65161085 Methanofervidicoccus sp. A16 2607662 Archaea Archaea 56.5 0.003   NTclustered gi|1438970377|gb|CP022242.1| 2607662 g29744 i0 100 0.0795755968169761 30 0 8 0 305 334 393592 393563 Methanofervidicoccus sp. A16 chromosome, complete genome blastn 30 56.5 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales   Methanofervidicoccus Methanofervidicoccus sp. A16

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;