RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA851399" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA851399 · 2 ✖

analysis 1

  • blastn · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
17417811 17417811 PRJNA851399_P_NODE_7694_length_313_cov_1.155303_g7241_i0 PRJNA851399 7694 313 1.155303 3.61609839 Philodina roseola 96448 Rotifera other_Eukaryota 579 1.0899999999999999e-160   NTclustered gi|37785582|gb|AY210469.1| 96448 g7241 i0 100 53.7859424920128 313 0 100 0 1 313 1504 1816 Philodina roseola 28S ribosomal RNA gene, partial sequence blastn 16835 579 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Philodina Philodina roseola
18690562 18690562 PRJNA851399_P_NODE_20775_length_176_cov_1.204724_g20322_i0 PRJNA851399 20775 176 1.204724 2.12031424 Abrochtha meselsoni 338310 Rotifera other_Eukaryota 315 1.7199999999999996e-81   NTclustered gi|2537903784|gb|KM043249.2| 338310 g20322 i0 98.864 98.3522727272727 176 2 100 0 1 176 88 263 Abrochtha meselsoni voucher Angl_1_1 18S ribosomal RNA gene, partial sequence blastn 17310 315 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinavida Philodinavidae Abrochtha Abrochtha meselsoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;