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contig_metadata

22 rows where analysis = "blastn", bioproject = "PRJNA851399" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 22 ✖

bioproject 1

  • PRJNA851399 · 22 ✖

analysis 1

  • blastn · 22 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
839117 839117 PRJNA851399_P_NODE_1181_length_1062_cov_5.026654_g976_i0 PRJNA851399 1181 1062 5.026654 53.38306548 Pseudochlorella pringsheimii 3072 Plants Plants 1345 0   NTclustered gi|1279575453|gb|MF683077.1| 3072 g976 i0 89.581 99.3446327683616 1075 90 100 20 1 1062 2549 3614 Pseudochlorella pringsheimii 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 105504 1345 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Pseudochlorella Pseudochlorella pringsheimii
839599 839599 PRJNA851399_P_NODE_9021_length_270_cov_3.936652_g8568_i0 PRJNA851399 9021 270 3.936652 10.6289604 Parachlorella kessleri 3074 Plants Plants 449 7.51e-122   NTclustered gi|254798615|ref|NC_012978.1| 3074 g8568 i0 96.667 155.607407407407 270 9 100 0 1 270 91886 92155 Parachlorella kessleri chloroplast, complete genome blastn 42014 449 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
2509376 2509376 PRJNA851399_P_NODE_15002_length_194_cov_1.393103_g14549_i0 PRJNA851399 15002 194 1.393103 2.70261982 Chlorellaceae 35461 Plants Plants 270 4.2499999999999985e-68   NTclustered gi|1279575453|gb|MF683077.1| 3072 g14549 i0 91.753 149.896907216495 194 16 100 0 1 194 1977 2170 Pseudochlorella pringsheimii 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 29080 270 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Pseudochlorella Pseudochlorella pringsheimii
2509441 2509441 PRJNA851399_P_NODE_23062_length_170_cov_2.925620_g22609_i0 PRJNA851399 23062 170 2.92562 4.973554 Trebouxia 13786 Plants Plants 315 1.64e-81   NTclustered gi|2105090|emb|Z95383.1| 13788 g22609 i0 100 100.023529411765 170 0 100 0 1 170 775 606 T.impressa 26S rRNA gene blastn 17004 315 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia impressa
3785965 3785965 PRJNA851399_P_NODE_6303_length_376_cov_4.565749_g5851_i0 PRJNA851399 6303 376 4.565749 17.16721624 Trebouxiophyceae 75966 Plants Plants 569 7.989999999999997e-158   NTclustered gi|1169296931|gb|KY364701.1| 63676 g5851 i0 94.37 28.4601063829787 373 17 99 4 5 375 5785 5415 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 10701 571 0.996497373029772 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
5061885 5061885 PRJNA851399_P_NODE_13884_length_202_cov_4.150327_g13431_i0 PRJNA851399 13884 202 4.150327 8.38366054 Chlorophyta 3041 Plants Plants 372 1.19e-98   NTclustered gi|655359727|gb|KJ616757.1| 3076 g13431 i0 100 99.5049504950495 201 0 99 0 2 202 1635 1435 Chlorella sorokiniana strain LB75 18S ribosomal RNA gene, partial sequence blastn 20100 372 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
5942350 5942350 PRJNA851399_P_NODE_1185_length_1060_cov_4.466864_g976_i1 PRJNA851399 1185 1060 4.466864 47.3487584 Pseudochlorella pringsheimii 3072 Plants Plants 1360 0   NTclustered gi|1279575453|gb|MF683077.1| 3072 g976 i1 89.842 99.3018867924528 1073 89 100 19 1 1060 2549 3614 Pseudochlorella pringsheimii 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 105260 1360 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Pseudochlorella Pseudochlorella pringsheimii
7611853 7611853 PRJNA851399_P_NODE_11826_length_223_cov_1.609195_g11373_i0 PRJNA851399 11826 223 1.609195 3.58850485 Chlorellales 35460 Plants Plants 254 5.06e-63   NTclustered gi|671743011|ref|NC_024626.1| 3076 g11373 i0 94.012 78.1569506726457 167 10 75 0 57 223 3708 3874 Chlorella sorokiniana isolate 1230 mitochondrion, complete genome blastn 17429 254 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sorokiniana
7612074 7612074 PRJNA851399_P_NODE_5146_length_440_cov_1.943734_g4695_i0 PRJNA851399 5146 440 1.943734 8.5524296 Trebouxia 13786 Plants Plants 363 1.73e-95   NTclustered gi|2105089|emb|Z95382.1| 53269 g4695 i0 100 71.5681818181818 196 0 68 0 245 440 110 305 T.gelatinosa 26S rRNA gene blastn 31490 363 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia gelatinosa
8886912 8886912 PRJNA851399_P_NODE_20047_length_177_cov_2.117188_g19594_i0 PRJNA851399 20047 177 2.117188 3.74742276 Chlorella 3071 Plants Plants 322 1.03e-83   NTclustered gi|270048048|gb|GU186909.1| 693274 g19594 i0 99.435 99.2824858757062 177 1 100 0 1 177 771 947 Chlorella sp. NTAI01 18S ribosomal RNA gene, partial sequence blastn 17573 322 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella sp. NTAI01
9767671 9767671 PRJNA851399_P_NODE_8968_length_271_cov_3.441441_g8515_i0 PRJNA851399 8968 271 3.441441 9.32630511 Dicloster acuatus 91190 Plants Plants 451 2.0999999999999997e-122   NTclustered gi|725651324|ref|NC_025546.1| 91190 g8515 i0 96.691 137.715867158672 272 7 100 2 1 271 97948 98218 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 37321 451 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
12318818 12318818 PRJNA851399_P_NODE_5190_length_437_cov_4.126289_g4738_i0 PRJNA851399 5190 437 4.126289 18.03188293 Parachlorella kessleri 3074 Plants Plants 763 0   NTclustered gi|254798615|ref|NC_012978.1| 3074 g4738 i0 98.169 113.391304347826 437 8 100 0 1 437 93989 94425 Parachlorella kessleri chloroplast, complete genome blastn 49552 763 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
12318824 12318824 PRJNA851399_P_NODE_6790_length_352_cov_2.049505_g6338_i0 PRJNA851399 6790 352 2.049505 7.2142576 uncultured Trebouxia photobiont 285713 Plants Plants 571 2.0699999999999997e-158   NTclustered gi|1273623725|gb|KY033354.1| 285713 g6338 i0 96.275 27.1505681818182 349 11 99 2 4 352 8861 8515 Uncultured Trebouxia photobiont voucher Lendemer 46119 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 9557 571 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
13593342 13593342 PRJNA851399_P_NODE_7631_length_315_cov_1.522556_g7178_i0 PRJNA851399 7631 315 1.522556 4.7960514 Trebouxia sp. SL0000003 3350044 Plants Plants 555 1.8399999999999994e-153   NTclustered gi|2917929693|emb|OZ234920.1| 3350044 g7178 i0 98.413 122.380952380952 315 5 100 0 1 315 2170019 2170333 Trebouxia sp. SL0000003 genome assembly, chromosome: 15 blastn 38550 555 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. SL0000003
13987674 13987674 PRJNA851399_P_NODE_15131_length_193_cov_1.465278_g14678_i0 PRJNA851399 15131 193 1.465278 2.82798654 Dictyosphaerium 247496 Plants Plants 331 1.91e-86   NTclustered gi|1231294796|gb|MF664509.1| 2026435 g14678 i0 97.906 99.0103626943005 191 4 99 0 3 193 2924 2734 Dictyosphaerium sp. WfA2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 19109 331 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dictyosphaerium Dictyosphaerium sp. WfA2
17417364 17417364 PRJNA851399_P_NODE_13514_length_205_cov_2.397436_g13061_i0 PRJNA851399 13514 205 2.397436 4.9147438 uncultured Trebouxia photobiont 285713 Plants Plants 379 7.229999999999999e-101   NTclustered gi|94448899|emb|AM159214.1| 285713 g13061 i0 100 97.419512195122 205 0 100 0 1 205 1476 1680 Uncultured Trebouxia photobiont partial 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and partial 26S rRNA gene, clone L-114-aI blastn 19971 379 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia uncultured Trebouxia photobiont
17417383 17417383 PRJNA851399_P_NODE_15234_length_192_cov_2.307692_g14781_i0 PRJNA851399 15234 192 2.307692 4.43076864 Chlorella variabilis 554065 Plants Plants 316 5.31e-82   NTclustered gi|1467029754|gb|MH818552.1| 554065 g14781 i0 96.354 117.630208333333 192 7 100 0 1 192 513 322 Chlorella variabilis isolate BIG large subunit ribosomal RNA gene, partial sequence; chloroplast blastn 22585 316 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Chlorella Chlorella variabilis
18690827 18690827 PRJNA851399_P_NODE_3815_length_549_cov_6.350000_g3384_i0 PRJNA851399 3815 549 6.35 34.8615 Chloroidium ellipsoideum 63676 Plants Plants 833 0   NTclustered gi|1169296931|gb|KY364701.1| 63676 g3384 i0 95.265 91.5391621129326 528 22 96 3 24 549 4421 3895 Chloroidium ellipsoideum 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S ribosomal RNA gene, complete sequence blastn 50255 833 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium ellipsoideum
18690914 18690914 PRJNA851399_P_NODE_8415_length_287_cov_1.285714_g7962_i0 PRJNA851399 8415 287 1.285714 3.68999918 Pseudochlorella pringsheimii 3072 Plants Plants 364 2.9999999999999993e-96   NTclustered gi|1279575453|gb|MF683077.1| 3072 g7962 i0 89.583 100.177700348432 288 28 100 2 1 287 3401 3687 Pseudochlorella pringsheimii 16S ribosomal RNA gene, partial sequence; tRNA-Ile and tRNA-Ala genes, complete sequence; and 23S ribosomal RNA gene, partial sequence; chloroplast blastn 28751 364 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Pseudochlorella Pseudochlorella pringsheimii
19085384 19085384 PRJNA851399_P_NODE_15375_length_191_cov_3.443662_g14922_i0 PRJNA851399 15375 191 3.443662 6.57739442 Chlorellaceae 35461 Plants Plants 353 4.02e-93   NTclustered gi|27530003|dbj|AB080309.1| 3074 g14922 i0 100 100 191 0 100 0 1 191 763 953 Parachlorella kessleri gene for 18S rRNA, partial sequence blastn 19100 353 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Parachlorella Parachlorella kessleri
21241657 21241657 PRJNA851399_P_NODE_7397_length_323_cov_3.656934_g6944_i0 PRJNA851399 7397 323 3.656934 11.81189682 Dicloster acuatus 91190 Plants Plants 566 8.759999999999998e-157   NTclustered gi|725651324|ref|NC_025546.1| 91190 g6944 i0 98.447 117.727554179567 322 4 99 1 3 323 99886 99565 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 38026 566 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus
23791451 23791451 PRJNA851399_P_NODE_19519_length_179_cov_1.176923_g19066_i0 PRJNA851399 19519 179 1.176923 2.10669217 Dicloster acuatus 91190 Plants Plants 287 3.82e-73   NTclustered gi|725651324|ref|NC_025546.1| 91190 g19066 i0 95.531 111.614525139665 179 8 100 0 1 179 131976 132154 Dicloster acuatus culture-collection SAG:41.98 chloroplast, complete genome blastn 19979 287 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Chlorellales Chlorellaceae Dicloster Dicloster acuatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;