contig_metadata
12 rows where analysis = "blastn", bioproject = "PRJNA851399" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4667596 | 4667596 | PRJNA851399_P_NODE_14464_length_198_cov_1.369128_g14011_i0 | PRJNA851399 | 14464 | 198 | 1.369128 | 2.71087344 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 259 | 9.42e-65 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g14011 | i0 | 94.611 | 282.323232323232 | 167 | 9 | 84 | 0 | 1 | 167 | 17720 | 17554 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 55900 | 259 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 9767226 | 9767226 | PRJNA851399_P_NODE_16148_length_188_cov_2.287770_g15695_i0 | PRJNA851399 | 16148 | 188 | 2.28777 | 4.3010076 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 281 | 1.89e-71 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g15695 | i0 | 93.617 | 130.218085106383 | 188 | 12 | 100 | 0 | 1 | 188 | 28335 | 28148 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 24481 | 281 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 11042882 | 11042882 | PRJNA851399_P_NODE_17689_length_184_cov_1.125926_g17236_i0 | PRJNA851399 | 17689 | 184 | 1.125926 | 2.07170384 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 121 | 4.24e-23 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g17236 | i0 | 79.444 | 7.58695652173913 | 180 | 29 | 96 | 7 | 1 | 176 | 3839205 | 3839380 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 1396 | 121 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 11437878 | 11437878 | PRJNA851399_P_NODE_9409_length_262_cov_1.098592_g8956_i0 | PRJNA851399 | 9409 | 262 | 1.098592 | 2.87831104 | Gemmata | 113 | Bacteria | Bacteria | 364 | 2.7e-96 | NTclustered | gi|1015440974|gb|CP011271.1| | 1630693 | g8956 | i0 | 91.698 | 145.87786259542 | 265 | 19 | 100 | 2 | 1 | 262 | 559795 | 560059 | Gemmata sp. SH-PL17, complete genome | blastn | 38220 | 364 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. SH-PL17 | |
| 14867349 | 14867349 | PRJNA851399_P_NODE_28692_length_166_cov_0.871795_g28239_i0 | PRJNA851399 | 28692 | 166 | 0.871795 | 1.4471797 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 171 | 3.68e-38 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g28239 | i0 | 85.89 | 2.6144578313253 | 163 | 20 | 98 | 3 | 5 | 166 | 1317177 | 1317017 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 434 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15261917 | 15261917 | PRJNA851399_P_NODE_22992_length_171_cov_1.254098_g22539_i0 | PRJNA851399 | 22992 | 171 | 1.254098 | 2.14450758 | Schlesneria | 656899 | Bacteria | Bacteria | 187 | 3.76e-43 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g22539 | i0 | 86.364 | 18.0116959064327 | 176 | 18 | 100 | 4 | 1 | 171 | 1264 | 1090 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 3080 | 187 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 | ||
| 16536421 | 16536421 | PRJNA851399_P_NODE_12593_length_215_cov_0.921687_g12140_i0 | PRJNA851399 | 12593 | 215 | 0.921687 | 1.98162705 | Chthoniobacter | 295577 | Bacteria | Bacteria | 303 | 4.74e-78 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g12140 | i0 | 92.857 | 237.251162790698 | 210 | 14 | 98 | 1 | 1 | 210 | 16357 | 16565 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 51009 | 303 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 18690607 | 18690607 | PRJNA851399_P_NODE_24055_length_169_cov_1.125000_g23602_i0 | PRJNA851399 | 24055 | 169 | 1.125 | 1.90125 | uncultured Planctomycetaceae bacterium | 100233 | Bacteria | Bacteria | 252 | 1.3e-62 | NTclustered | gi|2874253757|emb|OY969698.1| | 100233 | g23602 | i0 | 93.491 | 112.011834319527 | 169 | 11 | 100 | 0 | 1 | 169 | 4421391 | 4421559 | MAG: uncultured Planctomycetaceae bacterium isolate MFD00082.bin.2.56 genome assembly, chromosome: 1 | blastn | 18930 | 252 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 21241535 | 21241535 | PRJNA851399_P_NODE_36017_length_163_cov_0.894737_g35564_i0 | PRJNA851399 | 36017 | 163 | 0.894737 | 1.45842131 | Lacipirellula parvula | 2650471 | Bacteria | Bacteria | 241 | 2.7000000000000008e-59 | NTclustered | gi|1761017769|dbj|AP021861.1| | 2650471 | g35564 | i0 | 93.252 | 1 | 163 | 11 | 100 | 0 | 1 | 163 | 3416837 | 3416999 | Lacipirellula parvula PX69 DNA, complete genome | blastn | 163 | 241 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Lacipirellulaceae | Lacipirellula | Lacipirellula parvula | |
| 23791479 | 23791479 | PRJNA851399_P_NODE_21359_length_174_cov_1.648000_g20906_i0 | PRJNA851399 | 21359 | 174 | 1.648 | 2.86752 | Urbifossiella limnaea | 2528023 | Bacteria | Bacteria | 244 | 2.25e-60 | NTclustered | gi|1712585314|gb|CP036273.1| | 2528023 | g20906 | i0 | 91.954 | 161.540229885057 | 174 | 14 | 100 | 0 | 1 | 174 | 2018239 | 2018412 | Urbifossiella limnaea strain ETA_A1 chromosome, complete genome | blastn | 28108 | 244 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Urbifossiella | Urbifossiella limnaea | |
| 24185661 | 24185661 | PRJNA851399_P_NODE_879_length_1198_cov_2.429939_g719_i0 | PRJNA851399 | 879 | 1198 | 2.429939 | 29.11066922 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 1057 | 0 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g719 | i0 | 88.623 | 131.860601001669 | 879 | 87 | 88 | 11 | 44 | 915 | 1452 | 580 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 157969 | 1057 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 25460491 | 25460491 | PRJNA851399_P_NODE_12580_length_215_cov_1.228916_g12127_i0 | PRJNA851399 | 12580 | 215 | 1.228916 | 2.6421694 | Schlesneria | 656899 | Bacteria | Bacteria | 359 | 9.969999999999999e-95 | NTclustered | gi|12583970|gb|AF245374.1|AF245374 | 149589 | g12127 | i0 | 96.744 | 122.423255813953 | 215 | 7 | 100 | 0 | 1 | 215 | 2177 | 2391 | Planctomycete str. 639 23S ribosomal RNA gene, partial sequence | blastn | 26321 | 359 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | planctomycete str. 639 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;