RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "blastn", bioproject = "PRJNA851399" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA851399 · 2 ✖

analysis 1

  • blastn · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6337850 6337850 PRJNA851399_P_NODE_13985_length_202_cov_0.915033_g13532_i0 PRJNA851399 13985 202 0.915033 1.84836666 Candidatus Nanosynbacteraceae 2093822 Bacteria Bacteria 335 1.5599999999999993e-87   NTclustered gi|2306607015|emb|OX335598.1| 2026720 g13532 i0 96.585 257.757425742574 205 1 100 5 1 202 80549 80750 Candidatus Saccharibacteria bacterium isolate PRJEB56001 genome assembly, chromosome: contig00001 blastn 52067 335 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
19965909 19965909 PRJNA851399_P_NODE_32456_length_164_cov_0.886957_g32003_i0 PRJNA851399 32456 164 0.886957 1.45460948 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 148 1.6999999999999996e-31   NTclustered gi|2621704979|emb|OY762266.1| 2026781 g32003 i0 83.436 3.73170731707317 163 23 98 4 4 164 510933 511093 MAG: Candidatus Poribacteria bacterium isolate f15cbddf-0c87-47e8-aab1-4ca568006f86 genome assembly, chromosome: 1 blastn 612 148 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;